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berkeley_reactor_200306_planktonic_scaffold_69597_10

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(11934..12497)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.1
  • Coverage: 165.0
  • Bit_score: 233
  • Evalue 2.30e-58
hypothetical protein n=1 Tax=Singulisphaera acidiphila RepID=UPI000375F5E2 similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 177.0
  • Bit_score: 242
  • Evalue 2.10e-61
shikimate kinase similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 165.0
  • Bit_score: 233
  • Evalue 4.70e-59

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 564
ATGACGACCGAGACGACTCGACGGCGGGGCCTCGCGCTCGTGGGCGTGCGGGGGACGGGGAAGTCGACCGTGGGGCGGATCCTGGCCGAGCGACTGGGCTGGCCGTTCGCGGACGCCGACGTCGTGCTGGAGGCGAAGGCGGGCCGGTCGATCCGGACCATCTTCGCCGAGCTCGGCGAGCCGACGTTCCGGGACTGGGAAGAAGACGTTCTCGCCGACCTGACCGCGAAGCCGAGCCTGGTCCTGGCCACGGGAGGAGGCGCGGTGCTCCGCCCGTCGAACCGGGCGAGACTCCGGTCGTTCGGCTTCGTGGCCTGGCTCACGGCCGACCCGTCGGTGCTCGAAGGCCGGCTGCTCGCCGACCCCCGAGGGCTGGCCGGCCGGCCCGCCCTGACCTCGGTGGGCACGATCGCCGAGCTCGCCGGGCTGATCGAGGCCCGCGAGCCGCTCTATCGAGACGTGGCCGACGCCGTCATCAACACCGCGGGGAAAACGGCGGCCGAGGTGGCCGACGCGATCCTCGAGCACTGGTCTCCCGTGAGTCTCCACCCGCCAACGACCTGA
PROTEIN sequence
Length: 188
MTTETTRRRGLALVGVRGTGKSTVGRILAERLGWPFADADVVLEAKAGRSIRTIFAELGEPTFRDWEEDVLADLTAKPSLVLATGGGAVLRPSNRARLRSFGFVAWLTADPSVLEGRLLADPRGLAGRPALTSVGTIAELAGLIEAREPLYRDVADAVINTAGKTAAEVADAILEHWSPVSLHPPTT*