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berkeley_reactor_200306_planktonic_scaffold_70560_23

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 25898..27547

Top 3 Functional Annotations

Value Algorithm Source
Reverse transcriptase (RNA-dependent DNA polymerase) n=3 Tax=Singulisphaera acidiphila RepID=L0DH52_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 64.3
  • Coverage: 571.0
  • Bit_score: 680
  • Evalue 8.90e-193
reverse transcriptase similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 571.0
  • Bit_score: 680
  • Evalue 2.50e-193
Reverse transcriptase (RNA-dependent DNA polymerase) {ECO:0000313|EMBL:AGA28587.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 571.0
  • Bit_score: 680
  • Evalue 1.20e-192

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1650
ATGGGTTTCTTCGGACGTGTCTTGCGCTGGTTCCTGGGGGTTCCTCGACCCGAGGTGGTGGTGGACCGGGGAGATCCGGGCCCGCTTGCCGACGAATCTCCTTCGGTGACCGGGCCGACGTCGGCGCCCGAGGTCGCGGTGGCGGAGGACCCGTACTTCGCGCCGGGGGCCGTAAGTAAGCAGGCGGCGGCGGGGAAGGTGCCCGAGTTGGACGCCGGGGATTTCCTGCCGATCTCCCGGGCGGAGCTCAAGGAGGGGATCGGCGGGAGGAACCTGCTGGCGAACAACCCCTGGTTCGGGCGCCGGGACCTGATCCCCCCGGCGGACGACGAGCGGACGAAGCTCATCGACCGCGCGATGGTGACGCAGGGGTTGCTCACGCCCGAGCAGCTCGTCGAGATCCACCGGGTCGGTTTGGAGATGGATCGGCTCCGGCCGACGCTCGAGGCGATCGAGCACCGGGCGGCGTTCGAGGGGGCCGCGGCCGTCCAGGCCCGGGCGGACGAGAAGGCCCGGATCAAGGCGAGGAAGAAGGAAGAGGCCGCGGCGCGGAAACGGAGCCGGGACGAGGCGATCGCGCACCGGCATGCCACCGACATCACCTTCCTCGGCCGGGGGGTCTCGGGACGGTTGGGCGATCGCCAGGGCCGCGTCGAGGCCCTCGAGGCCGCCGGCCTCCCCGTCCTGAGCACGCCCGCCGAGTTGGCTCAGGCACTCGGCCTCTCGGTGCCCAGGCTCCGCTGGCTCGCGTATCACAACGAGGTCGCGACCCGGATCCACTACGTCCAGTTCTCGGTCCCGAAGAAGAGCGGGGGGACGAGGACGCTGAGCGCCCCGCATCGGACCCTGGCCGAAGCCCAGCGCTGGATCTTCGAGCGGATCGTCTCGACCCTCCCCGTCGAGCCCGCCGCGCACGGGTTCGTCCCTGGGAAGAGCATCCTCTCGAATGCCTCGGCCCACGTCGGCCGGGCGGTCGTCGTGAACATGGACCTCGAAGGGTTCTTCCCCAGCATCGGCTTCGCCCGAGTCCGGAGCGTCTTCCAGCGCCTGGGCTATTCGCCGGCGGTCGCGACGATCCTCGCCCTGCTCTGCACCGAGTGCCCCCGCCGCCTCGTCCAGTACGACGGCGCCGCTTATCACGTCGCGACGGGCCCTCGAGGGTTGCCGCAAGGGGCGTGTACCAGCCCCGGGCTCTCGAACCAGGTCGCCCGACGGCTCGACCGCCGCCTCCAGGGGCTCTCCAACACGCTCGGGCTGGTCTATACGCGATATGCCGATGACTTGACGTTCTCGGGGGACGATCCCCTGAAGGATCGCGTCGGCTACCTCATGGCCAGGGTCCGCCACCTCGCCCAGGACGAAGGCTTCGCCGTCAACGAGCCCAAGAGCCGCGTCCTCCGCCGCAACACCGCGCAACTCGTCACCGGCCTGGTCGTCAATGACCGGCCGGGCGTCCCTCGCGACGAGATCCGACGCCTCCGGGCGATCCTCCACCGCGCCCGGACCGAAGGGCTCGAGAGTCAGAACCGCGAACGACACCCGAACTTCCCCGCCTGGCTCCGCGGCAAGATCGCCTATGTCTCCATGTCCCGCCCCGAAGTGGGAGCACGCCTGCTCGCGGAACTCAACTCCCTCGACAGCCCGACCTGA
PROTEIN sequence
Length: 550
MGFFGRVLRWFLGVPRPEVVVDRGDPGPLADESPSVTGPTSAPEVAVAEDPYFAPGAVSKQAAAGKVPELDAGDFLPISRAELKEGIGGRNLLANNPWFGRRDLIPPADDERTKLIDRAMVTQGLLTPEQLVEIHRVGLEMDRLRPTLEAIEHRAAFEGAAAVQARADEKARIKARKKEEAAARKRSRDEAIAHRHATDITFLGRGVSGRLGDRQGRVEALEAAGLPVLSTPAELAQALGLSVPRLRWLAYHNEVATRIHYVQFSVPKKSGGTRTLSAPHRTLAEAQRWIFERIVSTLPVEPAAHGFVPGKSILSNASAHVGRAVVVNMDLEGFFPSIGFARVRSVFQRLGYSPAVATILALLCTECPRRLVQYDGAAYHVATGPRGLPQGACTSPGLSNQVARRLDRRLQGLSNTLGLVYTRYADDLTFSGDDPLKDRVGYLMARVRHLAQDEGFAVNEPKSRVLRRNTAQLVTGLVVNDRPGVPRDEIRRLRAILHRARTEGLESQNRERHPNFPAWLRGKIAYVSMSRPEVGARLLAELNSLDSPT*