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berkeley_reactor_200306_planktonic_scaffold_80938_5

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 4439..4768

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Rhizobium giardinii RepID=UPI00036CC1DB similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 109.0
  • Bit_score: 139
  • Evalue 1.50e-30
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 109.0
  • Bit_score: 136
  • Evalue 4.60e-30
Uncharacterized protein {ECO:0000313|EMBL:KFC71368.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 109.0
  • Bit_score: 136
  • Evalue 1.70e-29

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Taxonomy

Devosia sp. LC5 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGGCTCGCGAGAGGCACCTGGAAGCGCTGATCCAGAAAGACCTCGGCCCGATGCCCGGGCTGACGGAGAAGGCGATGTTCGGCGGGCTCGCGTGGATGCTCGACGGGCACTTGCTCTGCGCCGCCCGCGATGATGGGATGCTCGTCCGGCTGGGGAAAGGGCAGGATGCCTGGGCCCTGCGGATCGATGGAGTGGTCCCCATGCGGGTGGGCGACCGGCCGATGCCGGGCTGGGTCCGTTGTGGTGCGAACGTCTATGACGACGCCACGCTCCGCAAACGTTTAATCTCCCAGGCGATCACGTTCGTGGGCTCGCTGCCGCCGAAGTAG
PROTEIN sequence
Length: 110
MARERHLEALIQKDLGPMPGLTEKAMFGGLAWMLDGHLLCAARDDGMLVRLGKGQDAWALRIDGVVPMRVGDRPMPGWVRCGANVYDDATLRKRLISQAITFVGSLPPK*