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berkeley_reactor_200306_planktonic_scaffold_80938_14

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 17158..18276

Top 3 Functional Annotations

Value Algorithm Source
efflux transporter, RND family, MFP subunit n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C41A6 similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 379.0
  • Bit_score: 406
  • Evalue 2.20e-110
Putative Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:EJW10729.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 361.0
  • Bit_score: 281
  • Evalue 1.10e-72
secretion protein HlyD similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 354.0
  • Bit_score: 270
  • Evalue 5.30e-70

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Taxonomy

Rhodovulum sp. PH10 → Rhodovulum → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1119
ATGCACACTTTTCTTAAGTTTATGATCGCCGCGGGCGTCATTGCACCGGCGGCCGTCGTCACGATCGCGAGGGGAGACCGGCCGAGTGGCTCCGTCACCTCGGGCGTCAAGGCCCGGTCGGAGCCGCCTCCCCGGCACGTCCGCGTCCAGGAGGTCCGCGACGAGGGGACGACTACGGAGCAGTCGTATACCGGGGTGGTCCGGGCCCGATACGAGACCGACCTGGGCTTCCGGGTCGGCGGTAAGGTGGTGTCCCGGCACGTCGAGATTGGCCAGCGGGTCGGGGCCGGCCAGCCGCTGTACCGGCTCGATGCGGAGGATTACGAGCTCGCCGTGAAGGCGGCCGAGGCCGATCTCGTCGCGGCCGAGGCCGAGGTGAAGGTCACCATCGTCGAGCACGAACGCCGGGTGAAGTTGCGGAAGTCCGGGGCGGCCAGCCCGTCGGAGTTCGACAAGACCCTGTCGGATCGAGACGTGGCCCTCGGCAAGCGTGACCGGGCCGCCAGGATGCTCTCCCTGGCGCGGAACCGGCTCTCCTACTGCACCCTGGCGGCCGACGCCGGGGGGGTGATCACGGCCCTGCCGGCCGAGGTCGGGCAAGTCGTGGCCGAGGGGCAGCCGGTCGCCCGGCTCGCCCGGGATGGGGGGCGAGAGGCGGTCGTCAGCCTGCCCGAGAACCGGGTCGCCATGGCCCGCTCGGCGCCGGCCAACGTCACTCTCTGGTCGAGCCCGGGCAAGTCCATCTCCGCGAGGCTTCGCGAGCTGTCGCCGACCGCCGACCCGACGACGCGGACTTACCAGGCCCGCTTTTCGATGCCCGACGCCGGCCCGGAGGTCGAGCTCGGCATGACCGCGACGGTCCACCTCGTCCCGCCCCACGCGGCCCGAGGGTTCGTGCTGCCGCTCTCGTCGCTCTCCGGCCGAGGAGATCGGCCGGCGGTCTGGGTGGTGGGCCACAAGGCCGGGCGTCCGACGCTGACGCCGGTCGAGGTGCGGGAGTATCGGCAGGAGTCGGTGGTCATCGCCGACGGCCTGAAGCCGGGCGACCTCGTGGTGACGGCCGGCGTCCAGAAGATCGACCCGGCGTCGGCCGTCCTCCCGTGGGAGGACCGGCGATGA
PROTEIN sequence
Length: 373
MHTFLKFMIAAGVIAPAAVVTIARGDRPSGSVTSGVKARSEPPPRHVRVQEVRDEGTTTEQSYTGVVRARYETDLGFRVGGKVVSRHVEIGQRVGAGQPLYRLDAEDYELAVKAAEADLVAAEAEVKVTIVEHERRVKLRKSGAASPSEFDKTLSDRDVALGKRDRAARMLSLARNRLSYCTLAADAGGVITALPAEVGQVVAEGQPVARLARDGGREAVVSLPENRVAMARSAPANVTLWSSPGKSISARLRELSPTADPTTRTYQARFSMPDAGPEVELGMTATVHLVPPHAARGFVLPLSSLSGRGDRPAVWVVGHKAGRPTLTPVEVREYRQESVVIADGLKPGDLVVTAGVQKIDPASAVLPWEDRR*