ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_92981_18

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(28211..31006)

Top 3 Functional Annotations

Value Algorithm Source
Candidate histidine kinase, hybrid n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y604_RAMTT similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 589.0
  • Bit_score: 459
  • Evalue 5.40e-126
hybrid histidine kinase similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 589.0
  • Bit_score: 459
  • Evalue 1.50e-126
Candidate histidine kinase, hybrid {ECO:0000313|EMBL:AEG91508.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.2
  • Coverage: 589.0
  • Bit_score: 459
  • Evalue 7.60e-126

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ramlibacter tataouinensis → Ramlibacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2796
ATGCGGAGCGGGAAGGTCAACATCCTCCTCGTCGACGACCAGCCGAAGAACCTCTACGCCCTCGAGGCGATCCTCGAGGGAGAGGACCGGCGCCTCGTCCGCGCCGGGTCGGGCGAGGAGGCGTTGATGCGGATCCTCGACGACGACTTCGCCGTCATCCTCATGGACGTCCAGATGCCCGGGCTGGACGGCTTCGAGACCGCCGGCCTGATCCGGGAACGCGACCGCTCCAAGCACACGCCGATCATCTTCCTGACCGCGTTCGAAAGCAGCGACGTGCAGGTGTTCAAGGGATACTCCCTGGGCGCCGTCGACTACCTATCGAAGCCCCTGATCCCGGCCGTGTTGAAGTCCAAGGTCGGGGTGTTCGTCGAGCTCTTCCGGAAGACCGAGCAGATCCGGCAGCAGTCGGAGCAACTCGTCGAGAACCAGCGTCGGGAGCACGAGCGCGAGCTCTCCGAGGAGAAGCGGCGCTGGGAGATCGAGCGACTCCGCGAGGAGACCGCCCGCGAGAAGAAGATCTCCGAGGCGCTCACGAGGCGGACCCAGGAGCTGGCGGAGACCATCGCCGAGCGCGAGCGGGTCGAGGAGCAGCTCCGCCGCCGGGCGCGGCAGCAGGCGATCGTGGCCGAGCTCGGGCAACGGGCCCTGGAGGGGCTCGACCTCGACCGGCTCCTCGACGACGCGGTCACCGCGATCGCGGTGACCCTCGAGGTCGAGTTCAGCCGGGTCATGGAGCTCACCCCCGACTCGGGCGGGTTGCGGCTCCGGGCCGGGGTCGGTTGGGATCCCGGGGCGATCGACCGGCTCTCCCCCGGCGACGAGGCCCGCACCTTCTCCGGCGCGAGCCCGGGTCGGAACGAGCCCGTGGTCATCGAGGACTTCCGCAAGGGGCCGGGAGAGGGCCTCTCCCCGTTCCTCCTCGAGCACGGGGTCGTCAGCGGCCTGAGCGTCAACGTCCAGGACCGGCATCGCCCCTTCGGGACGCTCGAGGCGTTCAGCCGGGCCCCGAGGACCTTCACACCCGACGACGTCCATTTCGTGCTGGCGGTGGCTCACGTCCTCGCCGCGGCGATCCAGCGGAGGCGCGACGAGGACGAGCTCGCGGCGATCAAGGACGAGCTGGCGGTCCAGCTCGACGACATGACCCGCCTGCATGCCCTCAGCTCGAGGCTCTCGAACAGCCTCGAGCTCCAGACCGTCATGGGGCAGGTCCTCGAGGCCGTCACGAGCCTCCAGGGGACCGACCGCGGCGTCTTGATGCTCTACGACCGCGACCAAGACGTGATGACGACGGCCGCCAGCGTCGGCCTGACCGGAGACCAGGTCGACGCGACCGAGCAGATGACCTCCCAGCTCCAGGAGAACGGCACCGTCACGGCGTTCATCAGCGGGGGGATCATCGTCGAGGACTTCGAGTCCGACCCGGTCTTCGCCCCCCACCTCGAGGCCGCGATCCGCGCCGGCTGCCGGGCGGTGCGGAGCACCCCGCTCCTGACGGTCGGGGGCGAGCTGATCGGCACCATCGCCACCTACTTCGACCGCCCCCATCGCCCATCCGACCGCGAGACGAGGCTGGTCGAGCTCTACGGCCGGCAGGCCGCCGAGTTCATCGAGAACGCCCAACTGTATCGCCAGATCCGCGAGGCCGACCGTCGCAAGGACGAGTTCCTCGCCATGCTCGCGCACGAGCTGCGGAACCCCCTGGCCCCGATCCTCAACGCGCTACATTACCTCCGCTCGAGCCCGGAGGACGTCGAGGCCCTCGAGCAGGCCCTCGCGATCGCCGAGCGCCAGGTCCGGCACCTGGCCCGCCTCGTCGACGACCTCCTCGACGTCTCCCGGATCAGCTCGGGGAAGATCCAGCTCCGCATGGGCGAGGTCGTGCTCGAGGACATGCTGGCCCGGGCGATGGAGACCTCCCGCCCCCTGATCGAGGCGCGTCGCCACGAGCTGTCCTGTACGCTCCCCGACGAGTCGGTCATCCTCGAGGCCGACGCGGCGAGGCTCGAGCAGGTCTTCTCCAACCTCTTGAACAACGCGGCGAAGTACACCGAGGAAGGGGGACGGATCCGGGTCGCCGCCGAGCCCGCCGGGCGCGAGGTCGTGATCCGGATCCGGGACACCGGCATCGGGATCGCCCCCGAGCTCCTCCCGCGCGTCTTCGACCTCTTCACCCAGGACACCCGCTCGCTCGACCGGTCGCAAGGCGGGCTCGGCATCGGGCTCACCCTCGTGCGCCGGCTCGTCGAGATGCACGGGGGACAGGTCCGCGTCCAGAGTGAGGGTCTGGGCCGAGGGAGCGAGTTCATCGTGACCCTGCCGAGGGCCACGCCGGACCCCGATCGGGCCCGCCTCCGCAACCTCCCCCGGAACGGGACCGCGGCCGGAAACGGCGAGGGCCGAACGAAACGCATCCTCGTGGTGGATGACAATACCGACGGCGCGGCGATGCTCGCCAGGATCTTGAGGAGCTGGGGGCATGACGTGGCCGTCGCCCACGACGGCCCGACCGCGATCGACTCGGCCCGTGAACATCTCCCCGAGGTTGTCCTGCTGGACATCGGCCTGCCCGGCATGGACGGCTACGAGGTCGCCAAGCAATTTCGAGGGCCGCTCGGGCTCGAAAAGACTCTCCTCGTCGCCCTCACCGGCTACGGCCAGGGCGAGGATCGGCGACGCTCGAGGGAAGCCGGCTTCGACCAGCACCTGGTCAAGCCCGTCGACCCCGACGTGCTCAGGCAGATACTCGATGGATATCAGCCGATCGCGCCGCAGACCTCCGGGGCACACTGA
PROTEIN sequence
Length: 932
MRSGKVNILLVDDQPKNLYALEAILEGEDRRLVRAGSGEEALMRILDDDFAVILMDVQMPGLDGFETAGLIRERDRSKHTPIIFLTAFESSDVQVFKGYSLGAVDYLSKPLIPAVLKSKVGVFVELFRKTEQIRQQSEQLVENQRREHERELSEEKRRWEIERLREETAREKKISEALTRRTQELAETIAERERVEEQLRRRARQQAIVAELGQRALEGLDLDRLLDDAVTAIAVTLEVEFSRVMELTPDSGGLRLRAGVGWDPGAIDRLSPGDEARTFSGASPGRNEPVVIEDFRKGPGEGLSPFLLEHGVVSGLSVNVQDRHRPFGTLEAFSRAPRTFTPDDVHFVLAVAHVLAAAIQRRRDEDELAAIKDELAVQLDDMTRLHALSSRLSNSLELQTVMGQVLEAVTSLQGTDRGVLMLYDRDQDVMTTAASVGLTGDQVDATEQMTSQLQENGTVTAFISGGIIVEDFESDPVFAPHLEAAIRAGCRAVRSTPLLTVGGELIGTIATYFDRPHRPSDRETRLVELYGRQAAEFIENAQLYRQIREADRRKDEFLAMLAHELRNPLAPILNALHYLRSSPEDVEALEQALAIAERQVRHLARLVDDLLDVSRISSGKIQLRMGEVVLEDMLARAMETSRPLIEARRHELSCTLPDESVILEADAARLEQVFSNLLNNAAKYTEEGGRIRVAAEPAGREVVIRIRDTGIGIAPELLPRVFDLFTQDTRSLDRSQGGLGIGLTLVRRLVEMHGGQVRVQSEGLGRGSEFIVTLPRATPDPDRARLRNLPRNGTAAGNGEGRTKRILVVDDNTDGAAMLARILRSWGHDVAVAHDGPTAIDSAREHLPEVVLLDIGLPGMDGYEVAKQFRGPLGLEKTLLVALTGYGQGEDRRRSREAGFDQHLVKPVDPDVLRQILDGYQPIAPQTSGAH*