ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_97220_120

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 154399..155706

Top 3 Functional Annotations

Value Algorithm Source
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 440.0
  • Bit_score: 683
  • Evalue 1.50e-193
Beta-hydroxyacyl-(Acyl carrier protein) dehydratase FabZ n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DM15_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 440.0
  • Bit_score: 683
  • Evalue 1.10e-193
beta-hydroxyacyl-(ACP) dehydratase FabZ similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 440.0
  • Bit_score: 683
  • Evalue 3.10e-194

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1308
ATGGTCACGGCAAGGCGCCGACAGCGCACGATCGCACGGGAGTCGGGGGTTCGCGGCGTTGGGTTCATCCAGGGCACCGACGTCTCCGTGCGGTTCCGGCCGGCGGACGCCGATAAGGGAGTGGTCTTCGTCCGGGCCGACCTGCCCGGTCAGCCGTCGGTCCCCGCCCACATCCGCCACGTCATCCCGAGGCAGCGGCGGACGACGCTCCAGCAGGGCGAGGCCACCGTCGAGATGGTCGAGCACGTCCTCGCCGCGCTCGCGGGCCTGAGGATCGACAACTGCGTGGTCGAGATCGACTCCGTCGAGACGCCCGGCTGCGACGGCTCGAGCCAGGCGTTCGTCGAGGCCCTCAACGAGGCGGGCGTCGTCGAGCAGGACCGCGAGCGGGAGACGCTCGTCATCGACCGGCCCGTCACCGTGCGCGAAGGGCAGGCCGTCCTCACCGCCCACCCGGGCGACGGCCTCGTGCTCTCCTACCACCTCGACTACGGCCGGCAGACGCCGATCGGGGCCCAGAGCCTGTTCGTCGACGTGAGCCCGGAGTCGTTCCGGACCGAGCTCGCGCCGAGCCGGACGTTCCTGCTCGAGAACGAGGCCAAGGCCTTGCGGGAGGCAGGCATCGGGTCGCGGACGACCGAGTCGGACCTGCTGATCTTCGGCCCCGAGGGGGTGATCGGGAACGAGCTCCGCTATCCCGACGAGTGCGTCCGCCACAAAATCCTCGACATGGTCGGCGACCTCTCGCTCCTGGCCCGGGACCTGGTCGGCCACGTGGTCGCGCATCGCTCGGGGCACCAGCTCAACGCCGAGCTCGTCCGCAAGCTGATCGAGAGGGTGGCGTCCGAGAAGGCGGCCGTCCCCGGCCCGCTCGACATCGTCGCGATCATGAAGATCCTGCCGCATCGCTACCCGTTCCTGCTCATCGACCGCGTCCTCGAGCACGAGCCGTTCCGGCGCGTCGTGGCCCTCAAGAACGTCAGTTGCAACGAGCCGTTCTTCCAAGGGCACTGGCCGGGACGGCCGATCATGCCGGGCGTCCTGATCCTCGAGGCGATCGCCCAGGCGTCGGGCGTGCTCATGGCCAACGTGGTCGACGCCCAGGAGAAGTCGGCCCTCATCGTCGGCATCGATGATGTGAAAATCCGACGGGCGGTCGTCCCCGGCGATCAACTGCGCCTTGACGTGAACTGCCTGCGACTCAAGAATACTTCGGCCTATTTCCAAGGGGTCGCCACGGTCGGCGACCAGGTCGCGGCCGAGGCGAAGATCCGGTTCATGATCGTCGAGGCCGAAAACAACGCGTGA
PROTEIN sequence
Length: 436
MVTARRRQRTIARESGVRGVGFIQGTDVSVRFRPADADKGVVFVRADLPGQPSVPAHIRHVIPRQRRTTLQQGEATVEMVEHVLAALAGLRIDNCVVEIDSVETPGCDGSSQAFVEALNEAGVVEQDRERETLVIDRPVTVREGQAVLTAHPGDGLVLSYHLDYGRQTPIGAQSLFVDVSPESFRTELAPSRTFLLENEAKALREAGIGSRTTESDLLIFGPEGVIGNELRYPDECVRHKILDMVGDLSLLARDLVGHVVAHRSGHQLNAELVRKLIERVASEKAAVPGPLDIVAIMKILPHRYPFLLIDRVLEHEPFRRVVALKNVSCNEPFFQGHWPGRPIMPGVLILEAIAQASGVLMANVVDAQEKSALIVGIDDVKIRRAVVPGDQLRLDVNCLRLKNTSAYFQGVATVGDQVAAEAKIRFMIVEAENNA*