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berkeley_reactor_200306_planktonic_scaffold_127385_14

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(18830..20683)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00036E57C6 similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 462.0
  • Bit_score: 324
  • Evalue 1.80e-85
outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 30.9
  • Coverage: 580.0
  • Bit_score: 223
  • Evalue 1.20e-55
Outer membrane efflux protein {ECO:0000313|EMBL:ADV61765.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.9
  • Coverage: 580.0
  • Bit_score: 223
  • Evalue 6.10e-55

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Taxonomy

Isosphaera pallida → Isosphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1854
ATGCCGACAGCTCGCCAGGGAACCAGTGGGGGTTGGGGCAAGATGAAACGATATGCTCGGCCTTGCGGCCTCGTCGCAGCCTTGCTGCTCTCCTGGGACGACCCGACAGGATGTCGAGCCCAGTCGCTTGCCTCGCCGACGGCACCCGCGGTTTCGGCCGCGACGCCCCTGCTCCCCTCGACGGTGGTCCCCCCACGACCGGCCCAGGGTGAACGGGTCGTGAAGCCGAGGCCCGTCCCCGCGACGCGGCAGACGCCAGGGGCCGCGGCGAGGGCGACGACCACCAACATCGCGGCCCAGGCCACCCCGCCGGCGCGGGACGGGCTCACCGTGGACCCGCTGCCGGGGGCGTCGGCGCCGACGACGATTCGGCCGCGTAGGACCACCCCGGCGCCCTCGATCGGGGCGGACGGGCTCCCCGCCGGGTTGACGCCGGGGACGCCGGAGCCGATCGACGTGGCGTTGCCGATCAACCTCGCCACCGCCCTGAAGCTCGCCGACGCCAGGCCGCTCATCGTCGCCGCCGCCCAGGCGAGCGCGTGGGTGGCCGAGGCCCAGCTCACGCGGGCCAAGGTCCTCTGGATCCCGCAGCTCAACATCGGGTTCGACTACATCCGGCATGACGGCGGCGGCCCGGACTTCAACAAAGGCATCCTCACCGCCCCGAGCGTGAACTTCTTCTACGCCGGGGCCGGCATGTGGATGAACGTCGCCCTGAGCGACGCGATCTTCCAGCCCCTGGCCGCCCGGCAGGTCCTGCAATCCCGCAAGTGGGACATCCAGTCGGCGAAGAACGACGCCCTGCTCGCGACGGCGGACGCCTACTTCCGCGTCCACCAGGCGAGGGGGATGTACACCGGCACCCTCTACACCGTCCAGCGCGGGCACGACCTCGTCAACCGGATCGTCCGGCTGAGCAAGGACCTGGTCCCGACCGACGAGATCGACCGGGCCAAGAACATGGTCGCCGACCTCGAGCAGCGGGCCGTCTCGGCGCGCGAGGACTGGCGGGTCGCCAGCGCCGACCTCACCCAGGTCCTCCGCCTCGACCCCCGCGCCGTCATCGTGCCCCAGGAGCACGACCACCTCCAGGTCACCCTTATCGACCCCGCGAGGCCGCTCGACGACCTGATCCCCGTCGGCCTGACCAACCGCCCCGAGCTCGCCTCGAACCAGGCGCTCGTCCAGGCGACGGTGGTGCGGATCCGGCGTGAGAAGATGAGGCCGCTGCTCCCGAGCATCCTGATCAACGGGTTCCAGACCCCGAACGAAGAGCTCCAGGCGGGGATCTTCGGCATCGGGCCCAACAACAGCCTGAACCAGTGGACCGGCCGCGTCGACCTGAGCTATCAGCCCCTCTGGCAGCTCGACGCGTTCGGGATCGGGAACGTTGCTCGCGTGAAGGAGCAGCGCGGGGAGCAGTCGAAGGCGATCGTCGAGCTGTTCAAGGTCCAGGACCGCGTCGCGGGGGACGTGACCCGAGCGCAGGCCAGGCTCCAGTCGGCCACGCATCGCGTCGGGCAGGCCGAGCGTGCCCTGAAGACGGCCCTCGTCACGTTCAACGGGAACTTCGAAGGGCTCCAGCAGACCAGCCGCTTCGGCGACGTCCTGGAGCTGGTCAATCGGCCCCAGGAAGTGGTCTTCGCCCTCCAGCTCCTCAAGGTGGCCTTCGACGAGTATTACACCACCGTGGCCCAGTACAACCGGTCCCAGTTCGAGCTGTTCCACGCCCTCGGCTACCCGGCCAACGAAGTCGCGAGCGCCCGGCCGCCGGGCCCGATCGCGCCCGTGAACACGGAACGGCCGGCCTACCTGCCCCCGGTCGGCGAAGGGCCGCCCCCGGCCACCCGCTAA
PROTEIN sequence
Length: 618
MPTARQGTSGGWGKMKRYARPCGLVAALLLSWDDPTGCRAQSLASPTAPAVSAATPLLPSTVVPPRPAQGERVVKPRPVPATRQTPGAAARATTTNIAAQATPPARDGLTVDPLPGASAPTTIRPRRTTPAPSIGADGLPAGLTPGTPEPIDVALPINLATALKLADARPLIVAAAQASAWVAEAQLTRAKVLWIPQLNIGFDYIRHDGGGPDFNKGILTAPSVNFFYAGAGMWMNVALSDAIFQPLAARQVLQSRKWDIQSAKNDALLATADAYFRVHQARGMYTGTLYTVQRGHDLVNRIVRLSKDLVPTDEIDRAKNMVADLEQRAVSAREDWRVASADLTQVLRLDPRAVIVPQEHDHLQVTLIDPARPLDDLIPVGLTNRPELASNQALVQATVVRIRREKMRPLLPSILINGFQTPNEELQAGIFGIGPNNSLNQWTGRVDLSYQPLWQLDAFGIGNVARVKEQRGEQSKAIVELFKVQDRVAGDVTRAQARLQSATHRVGQAERALKTALVTFNGNFEGLQQTSRFGDVLELVNRPQEVVFALQLLKVAFDEYYTTVAQYNRSQFELFHALGYPANEVASARPPGPIAPVNTERPAYLPPVGEGPPPATR*