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berkeley_reactor_200306_planktonic_scaffold_134651_31

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(46973..48583)

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter n=1 Tax=Schlesneria paludicola RepID=UPI00029A0CDD similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 520.0
  • Bit_score: 514
  • Evalue 8.20e-143
Multidrug resistance efflux pump EmrB/QacA {ECO:0000313|EMBL:GAN77209.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 538.0
  • Bit_score: 517
  • Evalue 1.80e-143
EmrB/QacA subfamily drug resistance transporter similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 522.0
  • Bit_score: 503
  • Evalue 4.10e-140

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Taxonomy

Acidisphaera rubrifaciens → Acidisphaera → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1611
ATGAGCGGCGAATCCGGTTCCCGAGGCGGCCCCAAGGTCAAGGCTCCGGTCAACCACTGGGTCGTCGCCCTGACCGTGACGCTCGCCACGTTCATGGAGGTGCTCGACACCTCGATCGCGAACGTCGCCTTGCCTTACATCGCGGGCGGACTCTCCGTTGGGAAGAGCCAGAGCACGTGGGTCCTCACCAGCTACCTCGTGGCCAACGCGATCGTCCTGCCGCTGTCAGGATGGCTGATGGGGCTGATGGGACGCAAGCGGTTCTACATGACGTGCGTCTTCCTCTTCACGGTCAGCTCGGCACTCTGCGGCGCGGCCCCGAATATCGAGATGCTCATCCTCTTCCGGGTCCTCCAGGGGATCGGCGGCGGCGGCCTCCAGCCTTCGGAGCAGGGGATCCTCGTCGACACCTTCCCCGTCCGGTCGCGGGGGATGGCGATGGCCATGTACGGCGTGGCCGTCGTCGTCGCGCCGATCCTGGGGCCGGTGCTGGGGGGATACATCAGCGACAATTATTCGTGGCGTTGGATCTTCTATATCAACATCCCCATCGGGATCCTTTCGCTCTTCCTCACCAGCATCGTCGTCCAGGATCCGCCCGGGATGCTCGAGGAGAGGAGGCGGAACCGGGCGAATGGCCTCGGGATCGACTACGTGGGGATCATCCTGGTCTCCCTCGGCCTCGGATCCCTGGAAGTCCTCTACGCCAAGGGGCAGGAGTGGGACTGGCTCGGCGACCCCTCCTGGCGAGTCCACGCCTTCGCCATCTCGGCGGTCGTCGGGCTCGGCGCCTTCGCCATCTGGGAGCTCCTCCACCCGAATCCGATCGTCAACCTGCGCCTCCTCGGCGAGCGGAACTTCCTCGTTTGCGGGCTCTTGATCTACATCACCTTCGCCGTCCTCTACGGGGCGAACGTCAACACGCCGCAGATGCTCCAGGACCTCTTCGGATATGACGCGTTCCGCGCCGGGTTGGTCCTGTCCCCCTCGGCGTTCTTCACCATGGCGATGATGCCGGTCGTGGGCTTCTTGCTCGGGAAGAAGGTCGACGCTCGATTCATCATCCCCTTCGGCCTCGTCGCCGTCGCGGGGGCCAGCTACTGGCAGGCGCACCTGAACCTCGAGGCCTCGCCGTACACGATCATCCTCCCGCGTTGCCTCCAGATGCTGGGGGTCGGCCTGTTGTTCGTCCCGCTGAACAACGCGGCCTACCTCTACATCCCCAAGGGCCAGACCAACAACGCGACGGGCCTCTTCAACATGCTCCGCAACGAAGGGGGGAGCCTCGGGATCGCGATCGCCTCGACGATGGTCGAGCGTCGCGCCCAGTTCCACCACCTGCGCCTCGCGGAACACGTCCACCCCTCCAACCCCGCCCTCGACCCGATGCTCCAGACCCTCTCCCAGACGGCCGTCGTCCGGGGCGGTAGCACCCCCGTCGTCGGCGACCAGCAAAGCATCGGGCTCCTCACCCAGATCGTCAACGAACAGGCCCGTGAGCTCGCCTACCTCGACGTCTTCTGGATCTACTGGGTCATGATCCTGATCCCCTTCCCGCTGCTGTTCTTCATGAAAAAGTCGGTGGCCCGCGAGGGGGCCTCGATGCACTGA
PROTEIN sequence
Length: 537
MSGESGSRGGPKVKAPVNHWVVALTVTLATFMEVLDTSIANVALPYIAGGLSVGKSQSTWVLTSYLVANAIVLPLSGWLMGLMGRKRFYMTCVFLFTVSSALCGAAPNIEMLILFRVLQGIGGGGLQPSEQGILVDTFPVRSRGMAMAMYGVAVVVAPILGPVLGGYISDNYSWRWIFYINIPIGILSLFLTSIVVQDPPGMLEERRRNRANGLGIDYVGIILVSLGLGSLEVLYAKGQEWDWLGDPSWRVHAFAISAVVGLGAFAIWELLHPNPIVNLRLLGERNFLVCGLLIYITFAVLYGANVNTPQMLQDLFGYDAFRAGLVLSPSAFFTMAMMPVVGFLLGKKVDARFIIPFGLVAVAGASYWQAHLNLEASPYTIILPRCLQMLGVGLLFVPLNNAAYLYIPKGQTNNATGLFNMLRNEGGSLGIAIASTMVERRAQFHHLRLAEHVHPSNPALDPMLQTLSQTAVVRGGSTPVVGDQQSIGLLTQIVNEQARELAYLDVFWIYWVMILIPFPLLFFMKKSVAREGASMH*