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berkeley_reactor_200306_planktonic_scaffold_140538_21

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 23674..26031

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UNP6_METS4 similarity UNIREF
DB: UNIREF100
  • Identity: 43.4
  • Coverage: 553.0
  • Bit_score: 405
  • Evalue 1.00e-109
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 553.0
  • Bit_score: 405
  • Evalue 2.90e-110
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ACA17151.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.4
  • Coverage: 553.0
  • Bit_score: 405
  • Evalue 1.40e-109

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Taxonomy

Methylobacterium sp. 4-46 → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2358
ATGCCGAACGATAGGTCCTCGATCACCTCACGTTCGATCCGCGATCGTCTCCTGCCAGTCGTGCTCTATCTCCTCATCACCCTGCCGATCTATTACCAGCTCGTCTTGCGGCTCCAGCCTTACACGAGGCTGAACGTCCGGGCGCTCGGGTTCCTCGTCGTCCTCGCGCCGGTGTGGGCGTTGGGCCTCGGTGCGAGCCTGGCGGCCTTGGTGGCGGTCCACCTGGCCAACTCGCTCCTCGACGACGCGTTGGGGCAGCCCTCGTCGCTGCTCGGCGTCGAGGGCCTGCCGTTCCTCGTGGTGTCGGTGGCGATGGCCATGCTGATCCGGAGGTTGCAAGTCCTCGGAGAGCGCGTGAGGCAGGGCCAGAGCGAACGGCAGCGCTACGAGACCCAGGCGAGGGAGTCGGAGGCCCAGGCGAGGGAGTCGGAGGCGTGCTACCGGCAGATGTTCGAGGATAACCCGCACCCCATGCTGATCCTCGACGAGGTGACGCAGAAGCTCCTCGCGGCGAACGCCGCCGCCGTCGCGCAGTACGGCTACGGGCCGGAGGAGCTGCGGTCGATGACCCTGGCCGACCTGGCCCCTCCGGAAGGCCGTCGCCGGCCCGACGACCCGCGCAACGACGACGGGCCGGGGGCGGTCGGCAGCGGACCGACGCGGCACCGCAAGAGCGACGGGACGGTCATCGACGTCGAGGTCACGACCCACGACTTCCCGTTCGAGGGGAGGAAGGCCCGGCTCGCGCTGGTGCGGGACATCACCGAACGGATCCGCGTCCAGGAAGCGCTCGAGCATCAGGCCCTCCACGACGCGTTGACCGGCCTGCCGAACCGGGTCCTCCTCCGGCGCCAGGCCGAACGGGCCATCGCCATCGCCCAGGACGCGGACGAGCCCTTCGCCCTGCTGATGATCGACCTCGACCGCTTCAAGCAGATCAACGACACCCTGGGGCACCACCACGGCGACGTCGTGCTCCAGGTCGTCGGCCGTCGCCTCCGCCACGCGATGCGCGACTCGGACGTCACCGCCCGGCTCGGAGGCGACGAGTTCGCCATTCTCCTGGCGGGCGTGACGGAGGCCGAGGCGACCGCCGTCGCCGGGCGGTTGCTCGAGGGCCTGTCGCAGCCGATCACGCTCGACGGCCAAACCGTCGACGTCGGGGCGAGCATCGGGGTCGCCGTCTTCCCCGAGCATGGCCGGGACTACGACGAGCTGCTCCGCCGCGCCGACGCGGCCATGTACACGGTGAAGCACACGGGAGGTGGCGTCGAGGCCTACACCTCCGATTGCGACCGCTGCTGGGCCCGCCGGCCGTCCTTGGAGGGCGAATTGCAGCGGGGGATCGAGGACGGCGATCTCGTGCTCCACTACCAGCCCAAGCTCGACCTGCGGACCCGACGCATCCACGACGCCGAGGCCCTCGTCCGCTGGCAGCACCCGCGAGAGGGGATCCTCCTCCCCGCGCAGTTCCTCCCGCTCGCCAGGAGGGGCGGCCTGCTCAAGTCGCTGAGCCACTGGAGCCTCAAGGCGGCGGTGGGGCAGACGAGGGTCTGGCAACGCTCGGGGCTCAACCTCGCCGTCTCGGTCAACCTGCCGGCCTCGAGCGTCCAGGACCTCGGGCTCGTCCCCGCGATCCGGGACCTGCTCGACCGCTGCGACGCCCTCGCCTCCTGGCTCACGATCGAGATCACCGAGACCGTCATGATGGAGGACCCCGGCCGGGCGAGGCTCGTCCTCGGCCAACTCCACGACCTGGGGATCAAGATCGCGGTCGACAACTTCGGGACGGGCCACTCCTCACTCGTTTATCTGAAGGACCTCCCGATCGACGAGCTGAAGATCGACCGGTCCTTCATCAAGGACCTGGAGGTCGACCCGACGACCTCGGCCATCGTCCAGTCGACGCTCGAGCTCGGCCGGAGGCTGGGCGTGCGGGTCGTCGCCGAAGGGGTCGAGACGCAGCCGACGCTCGACCGGCTCGCCGCGATGGGCTGCGACGCCGCCCAGGGGTTCCTGATCGGCCGGCCGCTCCCCGCCGACGAGCTCACCAACTGGCTCGGCCGCCCGTCGAGGGGCCGGGATCGGCTCGCCACACCGCCGATCCCCTCGCGGAGGGCCGAAGCGATGCCGACCCCCTCTGGCCTGGCCCTTGAGATTTTCCCCGCCCTCACGAGCCTCACGTCCCAGGACGGCCTGGCCCCGGCTGAGCCCCCGAGGCAGGACCAGGAGCCCTTCGCTCAAGCCAGGGCGACAGGTTGCGGATGTTCCCGACGCTCCGTCGCCGATCCCGAGGGAGCGGACGATTCGGCCTCCACTGAAGCGTCGGCCCCCGGCCCTCGCCCGAAGAGCAGATAG
PROTEIN sequence
Length: 786
MPNDRSSITSRSIRDRLLPVVLYLLITLPIYYQLVLRLQPYTRLNVRALGFLVVLAPVWALGLGASLAALVAVHLANSLLDDALGQPSSLLGVEGLPFLVVSVAMAMLIRRLQVLGERVRQGQSERQRYETQARESEAQARESEACYRQMFEDNPHPMLILDEVTQKLLAANAAAVAQYGYGPEELRSMTLADLAPPEGRRRPDDPRNDDGPGAVGSGPTRHRKSDGTVIDVEVTTHDFPFEGRKARLALVRDITERIRVQEALEHQALHDALTGLPNRVLLRRQAERAIAIAQDADEPFALLMIDLDRFKQINDTLGHHHGDVVLQVVGRRLRHAMRDSDVTARLGGDEFAILLAGVTEAEATAVAGRLLEGLSQPITLDGQTVDVGASIGVAVFPEHGRDYDELLRRADAAMYTVKHTGGGVEAYTSDCDRCWARRPSLEGELQRGIEDGDLVLHYQPKLDLRTRRIHDAEALVRWQHPREGILLPAQFLPLARRGGLLKSLSHWSLKAAVGQTRVWQRSGLNLAVSVNLPASSVQDLGLVPAIRDLLDRCDALASWLTIEITETVMMEDPGRARLVLGQLHDLGIKIAVDNFGTGHSSLVYLKDLPIDELKIDRSFIKDLEVDPTTSAIVQSTLELGRRLGVRVVAEGVETQPTLDRLAAMGCDAAQGFLIGRPLPADELTNWLGRPSRGRDRLATPPIPSRRAEAMPTPSGLALEIFPALTSLTSQDGLAPAEPPRQDQEPFAQARATGCGCSRRSVADPEGADDSASTEASAPGPRPKSR*