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berkeley_reactor_200306_planktonic_scaffold_136392_21

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 33933..34226

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.0
  • Coverage: 84.0
  • Bit_score: 74
  • Evalue 5.50e-11
Ribonuclease VapC n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DCC1_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 84.0
  • Bit_score: 74
  • Evalue 3.90e-11
nucleic acid-binding protein, contains PIN domain similarity KEGG
DB: KEGG
  • Identity: 44.0
  • Coverage: 84.0
  • Bit_score: 74
  • Evalue 1.10e-11

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 294
ATGTCTCGGCGATCACCGCGGGCGAATTGTACACATGGGTGCTCCGCGCCAAAGCGGCTGACGGACCTGCTCGCCTTCTTTAAAGATGTGAAGATCCTCGATATCGACGAGCCCGTGGCCCGCAAATTCGGGGAAATCCGGGCGTCGTTGCTCGATGCCGGCCTGGCGAGTCCTGACATGGACCTCCTGAACGCCGCAACCGCACTCGTCCACGGATTGATCATGGTGACGCACAACATCCAAGACTATGACGCAGTCCCGGGGCTGATCCTGGCAGATTGGCTGAATCCGTAG
PROTEIN sequence
Length: 98
MSRRSPRANCTHGCSAPKRLTDLLAFFKDVKILDIDEPVARKFGEIRASLLDAGLASPDMDLLNAATALVHGLIMVTHNIQDYDAVPGLILADWLNP*