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berkeley_reactor_200306_planktonic_scaffold_162253_41

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 48083..48823

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 245.0
  • Bit_score: 402
  • Evalue 2.20e-109
tRNA pseudouridine synthase A n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDA4_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 245.0
  • Bit_score: 402
  • Evalue 1.60e-109
pseudouridylate synthase I similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 245.0
  • Bit_score: 402
  • Evalue 4.50e-110

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 741
ATGCGGAACATCAAGCTCCTCCTGAGCTACGACGGGACCGAGTTCTCCGGTTGGCAACGCCAGGCGGACCGGCGCACGGTCCAGCAAGAGCTCGAAGAGGCCCTCGGGCGACTCACCGGCGTCGAGCCTTCGACAAACGCGAGCGGCCGCACCGACGCGGGGGTCCACGCCCTCGGCCAGGTCGTCCATTTCTACACGGCGTCCCGGCATCCACCCGAGGTCTTCGTCAAGGCCCTGAACGCCATGCTCCCCGAGGATGTGCGGATCAAGGGGGCCTGGGAGATGCCCCAGTCGTTCCACGCCACCCTCGACGCCAAGTCGAAGCTCTACCGCTACGTGATCGACAACGGCGTGGTCGCCGACCCGTTCCAGAGGCGCTATAGTCACCACGTCTATCAGCCCCTCGACATCGAGGCCATGGACCGCGCCGCCCAGTCTCTGAGGGGGCGACACGACTTCCACAGCTTCGAAACCCACTGGCCGAATCGCACGAGCAGCGTCCGGACGATCGTCCACATCGCGGTCTCTCGGATGCTCGACTTCGTCTGGGTCGACGTCGAGGCCGACGGCTTCCTGTATAACATGGTCCGCTCGATCACCGGGACGCTCCTGATGGTCGGCACGGGCCGACGTCCCGAGAGCTGGGTCGCCGAAGCCCTCGCCGCCGAGGACCGTCGCGAAGCAGGTCCGACCGCCCCGCCGCAGGGGCTCTTCCTCGTCCGGGTCCACTACGGGAAATGA
PROTEIN sequence
Length: 247
MRNIKLLLSYDGTEFSGWQRQADRRTVQQELEEALGRLTGVEPSTNASGRTDAGVHALGQVVHFYTASRHPPEVFVKALNAMLPEDVRIKGAWEMPQSFHATLDAKSKLYRYVIDNGVVADPFQRRYSHHVYQPLDIEAMDRAAQSLRGRHDFHSFETHWPNRTSSVRTIVHIAVSRMLDFVWVDVEADGFLYNMVRSITGTLLMVGTGRRPESWVAEALAAEDRREAGPTAPPQGLFLVRVHYGK*