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berkeley_reactor_200306_planktonic_scaffold_162253_59

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 72020..72391

Top 3 Functional Annotations

Value Algorithm Source
Two-component system response regulator (Ntr family protein) n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QC79_DESAH similarity UNIREF
DB: UNIREF100
  • Identity: 34.5
  • Coverage: 113.0
  • Bit_score: 73
  • Evalue 1.10e-10
two-component system response regulator (Ntr family protein) similarity KEGG
DB: KEGG
  • Identity: 34.5
  • Coverage: 113.0
  • Bit_score: 73
  • Evalue 3.10e-11
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 34.5
  • Coverage: 113.0
  • Bit_score: 80
  • Evalue 1.30e-12

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Taxonomy

R_RIF_OD1_06_38_12 → RIF-OD1-6 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 372
ATGATTCCTCACAAGAAGACCATGCTAGTCGTCGACGACGATCGTTGGACGCGATTCGCCCTCGAGAGCATCCTCAAGCATCGGGGCTGGGACGTCCTCGTCTCGCCGACCGTCGCGCAGGGGCTCGGCATCCTCGAAGGGACGCACCCCGACTGCATCATCCTCGACCTGGACCTCCCCGACGGGAGCGGCGAGGGCATCCTCCGGAAGGTCCGCGACGCGAACCTCGACATCCGGGTCGTCGTCTGCACAGGAAACGACGAACCCCGACAGCTTGCCCAGGTGAAGGACTTGCACCCCGACGGCCTCTTCGTCAAGCCGATCGACGTCGATGAGGTCCTCGCCGCCTGCCGCTCGCCCGAAGTGGGCTAA
PROTEIN sequence
Length: 124
MIPHKKTMLVVDDDRWTRFALESILKHRGWDVLVSPTVAQGLGILEGTHPDCIILDLDLPDGSGEGILRKVRDANLDIRVVVCTGNDEPRQLAQVKDLHPDGLFVKPIDVDEVLAACRSPEVG*