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berkeley_reactor_200306_planktonic_scaffold_162419_71

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 83864..85462

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00036E57C6 similarity UNIREF
DB: UNIREF100
  • Identity: 38.3
  • Coverage: 493.0
  • Bit_score: 298
  • Evalue 9.20e-78
outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 32.7
  • Coverage: 550.0
  • Bit_score: 215
  • Evalue 2.90e-53
Outer membrane protein {ECO:0000313|EMBL:AGA26866.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.7
  • Coverage: 550.0
  • Bit_score: 215
  • Evalue 1.40e-52

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1599
ATGCGTCGGACACGCGTTCTCGGATGGTTGCTGACGGCCGTCCTCGCCCTCGCAACCTGGCGCCCCGTCGCCGAATCGGCACCCGTCCCGCCTCCGCCTCCACCCAACGACGATCCGGGTGTCGCCCCACCCGCCCCCATTCCTAACGCCGAGACGACATCGACGTTTCGGGCACGTGTGGCCGCCGAGCCCACCGAACGCGGCCTTCCGATCAACCTCGTGACGGCGTTGCAACTGGCCGGAGCGACCCCGCTCGACATCGCCGCGGCCGAGGCCCAGGTCCGACAGTCGCTCGCCCTCCTCCTTCAAGCGCGCGCCCTCTGGATCCCCAACCTCAACGGCGGAGTCGATTACTTCCGCCACGATGGGGTGCAGCAAAATATCTTCACGGGAGGTCTCTTCGTCAAAGGGCGCCAATCGTTCCTGGTCGGCGGAGGCCCGACCCTCTCGGTCGGGCTCACCGACGCGATCTTCGCGCCCCTGGCCGCTCGTCGGGTCGTCGCCTCGAGGAGGGCCGACCTCCAGGCGGCCCGGAACGACGCGCTCCAGTCGGTGACGCAGGCCTACTTCGATCTCCAGGAGGCCCGAGGCCGGCTCCTCGGCGCGATCGCGTCCGGGGAGCGGGCGAAACGGCTCGTCGACTACGCCCGAGGGCTCGCCCCGACGTTGATCGCCCCCCTCGAGATCAATCGTTCGAGGACGGAGCTCCAGAACCTGAAACAGGCCCAGCAACTGGCCATCCAGGACTGGCGAGTCGCGAGCGCCAGGCTCGCGGAGATCCTCCTGCTGGACCCGGCCGTGCTCCTCGAACCGATCGAGCCGCCGTTCTTGCTCCTGACGATGATCCCCTCGGACCAGCCCGCCGAGGCGTTGCTCCCGGTCGCGTTGCAGAACCGCCCCGAGATCGCCTCGAGGCGCGAGCTGGTCGAGGCGGCCAGGCAGCTCCTGAATCGAGAGAAGGGCCGCCCGTTCCTGCCCTACGTGGTCGCGACGAACCCGACCACGAGCTCGGGGCTGATCGGCGCGGGCAACTACTCCGGGGGGGCAAACCAGCAGCTCTCGCAGAATGGGTCGAGGGCCGACTTCGAGGTGGCCGTCGTCTGGGAGCTCCAGAACATGGGCTTCGGGAACGCGGGGCTCATCAAACAGCGCCACGCCGAGAGGGACCTCGCCTCGATCGAGCTGTCGAGGACGATCTTCCGCGTCAAATCCGAGGTCGCCCAGGCCCTCGCCCGGCTCCAGACGGCCCGAGTCCGGGTCGACGAGACGAAGGTGGAGCTGGAACAGGCCGTCGAATCCGCCGACAAGAACTTCATCGGCCTTCGCGAGACGACACGACCGGCGGGAGAATTGTTGCGGCTGGTGGTCCGTCCCCAGGAAGTCGTCGCCGCGATCATCGCGCTCAACGTCGCGTTCCAGGATTACAGCAACGCGATCAATGAGGCGAACCGGGCCCAGTTCGCCCTCTATCGGGCCCTCGGCCAGCCCGCCCAATGGATCACTTCGAAAGCCGCCGAGCCTCCGGCCGTGCAGCCGCTCCCGCACCCCCCGGCTCCCCCTGCGGCCCCGAACCCCTCGGATGTCCCGCCGATTCCTTAG
PROTEIN sequence
Length: 533
MRRTRVLGWLLTAVLALATWRPVAESAPVPPPPPPNDDPGVAPPAPIPNAETTSTFRARVAAEPTERGLPINLVTALQLAGATPLDIAAAEAQVRQSLALLLQARALWIPNLNGGVDYFRHDGVQQNIFTGGLFVKGRQSFLVGGGPTLSVGLTDAIFAPLAARRVVASRRADLQAARNDALQSVTQAYFDLQEARGRLLGAIASGERAKRLVDYARGLAPTLIAPLEINRSRTELQNLKQAQQLAIQDWRVASARLAEILLLDPAVLLEPIEPPFLLLTMIPSDQPAEALLPVALQNRPEIASRRELVEAARQLLNREKGRPFLPYVVATNPTTSSGLIGAGNYSGGANQQLSQNGSRADFEVAVVWELQNMGFGNAGLIKQRHAERDLASIELSRTIFRVKSEVAQALARLQTARVRVDETKVELEQAVESADKNFIGLRETTRPAGELLRLVVRPQEVVAAIIALNVAFQDYSNAINEANRAQFALYRALGQPAQWITSKAAEPPAVQPLPHPPAPPAAPNPSDVPPIP*