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berkeley_reactor_200306_planktonic_scaffold_162419_76

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 91935..93350

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R971_PIRSD similarity UNIREF
DB: UNIREF100
  • Identity: 34.3
  • Coverage: 460.0
  • Bit_score: 244
  • Evalue 1.80e-61
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 34.3
  • Coverage: 460.0
  • Bit_score: 244
  • Evalue 5.10e-62
Tax=RBG_16_Planctomycetes_64_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 34.7
  • Coverage: 461.0
  • Bit_score: 270
  • Evalue 2.50e-69

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Taxonomy

RBG_16_Planctomycetes_64_12_curated → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1416
ATGCCGACCATCGCGGATGAGCCTCGAGGATCGTCGATCGCGCGGGGCCAAGGCCGAGCCATCGGGTCGGTCCTCGTTCTGGTCGTTTGCCTCCTGGCCTCGGCGGGTTGCCACCGCGCGGACACCGGCCACGCCCGTGCGAAGACGAAGGACCAAGGCAAGGACGGGCCCGCAGCCTCGTCGTTCCAGGTCATCCACCCCGAGCGCCGGGACATCCGGATGCGCGTCATCCAGCCCGGCACGGTCGAGGCGTTCGAGTCGACGCCGGTTTACTCGCATATTGCAGGATATGTGAAAAACTACAATTTCAACATCGGCGATCGGGTCAAGGCCGACGACGTGCTCCTCGACATGTGGATCCCGGACATCGAGGAGCAGCTCAAGCAGAAGTCCGCGGCCTTGAAGCGGGCCGAGATCCAGATCCGCGTGACCGAGAGCATGCTGAGGGCGGCGGAGTCGCGGCTCGAGACGGCGGAGGCGAAGATCGACTCGGCGAAGGCGGGGGTGAAGCGGGCCCAGGCGAGCTATACGCGTTGGGATTCGGAGTACCGCCGACTCGTGACCCTGGTGAACAACCAGGTCCTCGACCGTCAGGTGCGCGACGAGACCTACCGGCAGTTCGAAGAGGCGGAGGCGGCCCGAGACCAGGCCAATGCCATGGTCGCCGAGACGACCGCGGGCCGAGACACCGCCAAGGCCGACCGCGACGAGGCCCGGGTCAATGTCGAGGCCGCTCGCGCCGACTTCGCTGTGGCACAGGCCGAGGAGCGCCTCGCGGCGGTCAACGTCGCGTATGGGCGGATCAAGGCCCCGTATCCCGGCGTGATCACCCAGAGGAACATCAGCCCAGGCGATTACCTCCAGGCCGGGGTGAATCCCCAAGGACGCCCGATCTTCGTCCTCCAGCAGACCGACCCGGTCCGAGTCTTCGTCGGCGTCCCCGAGTTGGCGGCCCCCTTCATCAAGGATCAGGATCCGGCCACCCTCCAACTCCAGGCGATCCCGGGCTCGACGCGGCAGGGCAAGGTCGTCCGTTCGGGATTCTCCCTCAACCCCTCGACCCGGACCCTCCAGGCCGAGATCGACATCCCCAACGCCGACGGGCACCTCCGCCCCGGCATGTACGTCACCGTCAAGATCGAGATCGTCCGCAAGAACGCCTGGACCCTCCCCTCGAAGGCGATCGGGTTCCAGGGGGGTCAGAACTACTTCATCTACCTCCAGGTCGACGGCAAGCCCGTTCACACCCCCGTCCTGCTCGGGCCGTCCGACGACACCCACACCGAGGTCCTTCGCCAGCGACGATCCGGTTCGTCCGAGGAGGATTGGACCCCCTTCGATGGCAGCGAGCCGGTCTTGCTGGGGAGCCTCGACGCACTCGCCAAGGATCAGGAAGTGGCCACGCCCTCGAAGTGA
PROTEIN sequence
Length: 472
MPTIADEPRGSSIARGQGRAIGSVLVLVVCLLASAGCHRADTGHARAKTKDQGKDGPAASSFQVIHPERRDIRMRVIQPGTVEAFESTPVYSHIAGYVKNYNFNIGDRVKADDVLLDMWIPDIEEQLKQKSAALKRAEIQIRVTESMLRAAESRLETAEAKIDSAKAGVKRAQASYTRWDSEYRRLVTLVNNQVLDRQVRDETYRQFEEAEAARDQANAMVAETTAGRDTAKADRDEARVNVEAARADFAVAQAEERLAAVNVAYGRIKAPYPGVITQRNISPGDYLQAGVNPQGRPIFVLQQTDPVRVFVGVPELAAPFIKDQDPATLQLQAIPGSTRQGKVVRSGFSLNPSTRTLQAEIDIPNADGHLRPGMYVTVKIEIVRKNAWTLPSKAIGFQGGQNYFIYLQVDGKPVHTPVLLGPSDDTHTEVLRQRRSGSSEEDWTPFDGSEPVLLGSLDALAKDQEVATPSK*