ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_149613_32

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(49903..50589)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Schlesneria paludicola RepID=UPI00029A2D93 similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 225.0
  • Bit_score: 256
  • Evalue 2.20e-65
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 34.8
  • Coverage: 221.0
  • Bit_score: 105
  • Evalue 1.40e-20
Tax=RBG_13_Planctomycetes_63_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 224.0
  • Bit_score: 246
  • Evalue 1.90e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Planctomycetes_63_9_curated → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 687
GTGCTGAATACGATTCCCCGACAGAAGATCCGCGACGTCGTCGTCGAGCGGCTCAAGAGTTACATCACGAGCGGCGGGCTCAAGCCCGGCGATCGTTTGCCGAACGAGTCGGAGCTGGCGGCGACGTTCGGGGTCAGCCGGCTCTCGCTCCGCGAGGCGACGAAGGGGCTCGAGCTGTTCGGCATCGTCGAGTCGAAGACGGGCGTCGGGCTGACGGTGGGCGAGGTCAACCTGGAGCGCGTCACGGGGCACCTCGGGTTCCACCCCGCGCTTCTGAGCGGGTCGCCGAGGCAGCTCATCGACACGAGGATCGTCGTCGAGACCGGGGCCCTGCCCTACACGGCGAGGCGCATGGCCGAGGATCCGGCGGTCTACGAGTCGCTCCGGCGGATCGCCGGGCGGTTCACCACGACGAGCGACCTGGACGAGCGGATCACGCTGGACATCGCCTTCCACCGCGCCCTGCTCGACGCCAGCGGCCTGGCGCCATTGGTCGCCTTCAACGACTTGCTGCAAATCTTCTTCAAGAAGTTTCATGATAGCGTGAAGGCTGCCGAATGGCAGTGCGGGATCGAGGGCCATCAACGGATCATCGACGCGCTCCGCGACCAGGACGTGGCGAAGGCGAGCGACGAACTCCGACGGCACATCGAGAGTCACGAGGATCGCATGGGGGCGCGGGCATGA
PROTEIN sequence
Length: 229
VLNTIPRQKIRDVVVERLKSYITSGGLKPGDRLPNESELAATFGVSRLSLREATKGLELFGIVESKTGVGLTVGEVNLERVTGHLGFHPALLSGSPRQLIDTRIVVETGALPYTARRMAEDPAVYESLRRIAGRFTTTSDLDERITLDIAFHRALLDASGLAPLVAFNDLLQIFFKKFHDSVKAAEWQCGIEGHQRIIDALRDQDVAKASDELRRHIESHEDRMGARA*