ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_150973_1

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 2..2365

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036A0C70 similarity UNIREF
DB: UNIREF100
  • Identity: 26.9
  • Coverage: 706.0
  • Bit_score: 164
  • Evalue 3.10e-37
Uncharacterized protein {ECO:0000313|EMBL:KFE66749.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 27.7
  • Coverage: 809.0
  • Bit_score: 177
  • Evalue 4.90e-41
T1SS secreted agglutinin (RTX) similarity KEGG
DB: KEGG
  • Identity: 26.4
  • Coverage: 836.0
  • Bit_score: 156
  • Evalue 2.40e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyalangium minutum → Hyalangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2364
TACTCCTCCTCCAGCCCTACCGCCCCGGGTGAATCCATCGCCTGGCCCATGCCTTCCTACAATCACTTCGACGGTTCCACGGAAGTCGCCAACTCCACCAACGCCGTGAATGTCTACGGCACTACGATCCCTGTGGACCCGAGTCGGGTCCTAAAGGATCTGTCACTTCCGAATGACAACAGGATCAAGATCCTGGCCGTGAACATCGCACGCCCTGGTCCGCAGGTGCCGATGGGCTCGGTGATGCACACCGGTGGCTCGACATTCCCGATCCCCAGCAACACAATCGGCATCTCTTCTGACAACAATACTTCTGTGGGGGCCGGTCTCGATAGCTTCGGCAATACCTATTCTGCTAGTGCGCTCGGCACTGCCGTGTACTGGGGTGGCCAGACGTTCGGTATTGGAGTCGCCGGGAATAACAATGTCCAGAGCCTCAACGGCGTTTCCATCGACCTCCCCGACGGCCAATTTACGAATCTACTATTGCTGGGCACGGCCGTCAACGGTACCCACGTCGGCCAGATCGTCGTGTGGTACAATGATGGCACCTCGTCCACGTTCAATCAGACGTTCAGCGACTGGGCCGGCGGCACCACGGCCGCCGGGGAATTCGTCGCCAGGACAATGCCTTACTACAACACTTCGTCCGGGCCGGCGACCGGGATCCGATACCTCTACGGCTATAACTTCACACTAGACCCCACCAAGACCGTCCGCTACTTGCAGATCAGTAACGACAATAATATCAAGTTCGTGGCGATGAATCTGATCAATTCACCGTCGCAGGTATCGATGGGTTCTGCAGCGAATCCGAGTGGTAGCTCATACTCTGTTCCTTTTAATACGGTCGGTATTACCCTCGGCAACTACACTGCGGTCGGTGGGGGTCTCGACAATGCCGGCAACACTTTTTCGGCAAGCGCCTTGGGGAACTCAGTTGCTTGGTCCGGCCAAACCTTTAACATCGGTGTAGCCGGGGTCAACAATGTCCAGAGCTTCGGCGGAGTTCCCGTCGATCTGCCGAATGGCCGATTCACGAACCTTTTGCTGCTGGGCGCGGCCGTCAACGGCTCCCGTCCCGGCCAGCTCGTCGTGTGGTACAACGACGGCACCTCGTCCACGTTCAACCAGACGTTCAGCGACTGGGCCAGCGGCACCACGGCCGCGGGGGAATCCATTGCCTTGCCAATGTCCTACTACAACACATCGACCGGTCAGATGACCGGTGCTCGGTATCTCTACGGCTATAATTTTACCCTCGATCCCAGCAAGACCGTCTCCTACCTGCAGATCAGCAACGACAACAATATCAAAGTTCTCGCGATGAATCTGATCAACTCAGGCGGTTGGCAGCCTCCTAGCGGGAAGGTTGTCAACGACGCCCCCGTCGGCGTCGATAAGGCCGTCACCATCCTCGAAGGCCACTCCTACACCTACACCGTCGCCGACTTCGGCTTCTCAGACCCCAACGACAGCCCCGCCAATAACTTCGTCTCCATCGTCGTCACGAACGTCTCCCTCGCACCGGGCCTCACCTACAACGGCGTCGCACCCGCAAACGGCACCGTCATCCCTGTCGCCGACATCGCCGCAGGTAAGCTCGTCTACACCCCGCCCGCAAACGCCTACGGCGACCGCTACGCCAAGTTCTCATTCCAGGTCCGCGACGACGGCGGAACCTCCAACGGGGGCGCAAACACCGACCCCGTCGCCAGGTCCATGTACGCCACCATCACGTCCGTGGCCACCCAGCTGGCCTTCACCACCGAGCCACCGTCCTCCGTCAAGACGGCCGAGCCCTTCTCCGTGACCGTGATCGCCAAGGACGCCAGCGGGAACCTCGACCCGAACTTCTCCGGCTCCGTCACCGTGAGCCTCACCACCAACCCGGGCAACGGGGCGCTCGGCGGGACGCGCACGGTGCTGGCCGTGCACGGCGTGGCCACGTTCACCGGCCTCTCCCTCAACAAGTCGGCCTCCGGCTACATCATCACCGCCTCGGCGACGGGGCTGACCGGGATGACGTCCACGCCGATCGACGTCACGCCCGCCGCCACCCAGCTGGCCTTCACCACCGAGCCACCGACCACGGTCCAGATCGGGGTGGCCTTCTCACTGACGGTGACGGCGGAGGATGAGAACGGAAATCTCGACCCTAATTATTCGGGCATCGTGACGGTGAGCTTGGCAGCGAACCCCGGCAGCGGGATGGTCAGTGGGACGTTGAACGTGCAGGCCGTGCACGGCGTGGCGACCTTCACCGACCTCATCCTGAACAAGCCGGCGGTCGGATATCTGATCAAGGCGACGTCGTCGGGGCTCGCACTGGCGACGTCGTCGTCGATCACGGCCACCTCGTAA
PROTEIN sequence
Length: 788
YSSSSPTAPGESIAWPMPSYNHFDGSTEVANSTNAVNVYGTTIPVDPSRVLKDLSLPNDNRIKILAVNIARPGPQVPMGSVMHTGGSTFPIPSNTIGISSDNNTSVGAGLDSFGNTYSASALGTAVYWGGQTFGIGVAGNNNVQSLNGVSIDLPDGQFTNLLLLGTAVNGTHVGQIVVWYNDGTSSTFNQTFSDWAGGTTAAGEFVARTMPYYNTSSGPATGIRYLYGYNFTLDPTKTVRYLQISNDNNIKFVAMNLINSPSQVSMGSAANPSGSSYSVPFNTVGITLGNYTAVGGGLDNAGNTFSASALGNSVAWSGQTFNIGVAGVNNVQSFGGVPVDLPNGRFTNLLLLGAAVNGSRPGQLVVWYNDGTSSTFNQTFSDWASGTTAAGESIALPMSYYNTSTGQMTGARYLYGYNFTLDPSKTVSYLQISNDNNIKVLAMNLINSGGWQPPSGKVVNDAPVGVDKAVTILEGHSYTYTVADFGFSDPNDSPANNFVSIVVTNVSLAPGLTYNGVAPANGTVIPVADIAAGKLVYTPPANAYGDRYAKFSFQVRDDGGTSNGGANTDPVARSMYATITSVATQLAFTTEPPSSVKTAEPFSVTVIAKDASGNLDPNFSGSVTVSLTTNPGNGALGGTRTVLAVHGVATFTGLSLNKSASGYIITASATGLTGMTSTPIDVTPAATQLAFTTEPPTTVQIGVAFSLTVTAEDENGNLDPNYSGIVTVSLAANPGSGMVSGTLNVQAVHGVATFTDLILNKPAVGYLIKATSSGLALATSSSITATS*