ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_165720_32

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 35416..35802

Top 3 Functional Annotations

Value Algorithm Source
PilT protein domain protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQ88_ROSCS similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 128.0
  • Bit_score: 132
  • Evalue 1.60e-28
twitching motility protein PilT similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 128.0
  • Bit_score: 132
  • Evalue 4.50e-29
PilT protein domain protein {ECO:0000313|EMBL:ABU59734.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 128.0
  • Bit_score: 132
  • Evalue 2.30e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Roseiflexus castenholzii → Roseiflexus → Chloroflexales → Chloroflexia → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 387
ATGAAATGGCTACTGGACACCTGCTCGCTGCTCTGGTTCCTGACCAATGACGCCAAGATGAGTCCCGGCGTCCAGGCGGTGATCGAGGATGCGACCAACGAACGATGGCTGTCCCCGATCAGCTTGATGGAGATCGCCCTCAAGGTGCGGATCGGCAAACTACCGCTTCCCGCCCCGTATCCCGTCATGTTCCCCGCGCTCCTGGACTTGAACAAGATCGTGCTTCTCCCTCTCGCTTCCGGACACATCGAGCCATTGACGAGCCTGCCGCTGCACCACAAAGACCCGTTCGATCGGCTGATCGCCGCGACCGCGCTTGTGGAAGGGCTGACACTGGTCTCCGCGGACTCGGCCTTCGACGCCTACGGTGTGACTCGACTCTGGTAA
PROTEIN sequence
Length: 129
MKWLLDTCSLLWFLTNDAKMSPGVQAVIEDATNERWLSPISLMEIALKVRIGKLPLPAPYPVMFPALLDLNKIVLLPLASGHIEPLTSLPLHHKDPFDRLIAATALVEGLTLVSADSAFDAYGVTRLW*