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berkeley_reactor_200306_planktonic_scaffold_165720_68

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 82286..85951

Top 3 Functional Annotations

Value Algorithm Source
alkyl hydroperoxide reductase n=1 Tax=Schlesneria paludicola RepID=UPI00029A27ED similarity UNIREF
DB: UNIREF100
  • Identity: 27.2
  • Coverage: 659.0
  • Bit_score: 167
  • Evalue 4.30e-38
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 215.0
  • Bit_score: 165
  • Evalue 6.00e-38
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA27703.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 215.0
  • Bit_score: 165
  • Evalue 3.00e-37

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 3666
ATGAACGTGTTTACAATCCTCCCGGACGTCGCCGAGGCCCTGACGATCGCCCCGACGGCCCTGGTCCTCGTCGCGAAGTGGACGGTCCTGCTCGCCCTGGCCTGGTTGGTCCACCTTCGGCTCGAGGGCCGGAACCCGCGCTGGCGCGTCGCCCTCTGGCGTTCGGCCATCGTGGGCGTCCTGCTCGTCGCCTTGCTCTCCGGCCTCCCGCCGCTCCTGGAGTGGCGACTCGCCCGGGAGGAACGGCCCCAGGCCAGCCTCGTTGCGACCCTCGAACCCGAGCCGATCACGTCGCCGGGACAAGAGCCGAGACCGCGCTCGGCCGGCGAGGTTCGCCCGGCCGACACCGCTCCGAGGTTCAACTCTCGGGCCGTCTCGACCGATCGCATCCCGTCGACCGCGGTCGGACTCGGATCCAACGGACCCACCCCTCGCCGCGACGAAGTCGATGGCGCAAAGGCCAGGGCAGGGGGAGGAACCATCCACTCCCGAGAGACCTGGACGCGTTGGCTGGCCCCGGGCCTGATGACCGCCTGGGCGTTGGGAGCCCTCGTCCTGGCGGCGCGGCTCACCTTGGCGAGCCTACGGCTCTCGAGCCTCATCCGGCGCTCTGCGGAGGCCCCGGAGTGGGTCGTCCGCGAATGCCGGGACATCGCCGGCCGCATGGGGATCGCCCGGGAGATCCGCGTCCGCCGATCGGCCGAGGTGGGGACGCCCTGCCTGGCCGGGGCCTGGCGACCCGTCCTGCTGCTCCCGGACCGGCAATGCCGGGAGGGCGAGCGCGACGACCTCGAGGCCATCCTCGCGCACGAGCTGGCGCACGCCCGAGGCCACGACCTCGCCTGGAACGACGCCGCCCACCTGGCGACGCTCCCGCTCTGGTTCCACCCGCTCGCCTGGCGGATCCGAGACGCCCACGCGTCGGCCTGCGACGCCGTCAGCGACGCCGTGGCCGCCGACTACCTCGGCGACGTCGCCTCGTACTGCCGGACCCTGGCCCGGCTCGCCTTGCGCGTCGCCCTCCCGCCCTCGTCACGGGGCCTCGCGATGGCCCACGCGTCCGAGGTCCTCGGACGCATCGAGACCCTGAATCGGAAGGTCTTCCCGGCCCCACTCCCGAGGAGGCCCGTCATGGCCGCGCTGTTCTCCACGAGCGTCCTGGTCGTGCTCATCGGCGGCCTGGCCGTCACCCGCGCCGAGCCGGTCGAGGACGCCGCCAAGACTCCCGCCCCGACCGCAATTGAGGTGGCCGCCCCCGATGGCCCCGCACCCCTTCCGCGAGAACGTGAGCGGACGGGTCCCGAGGTCACCCGTGAGCTTTCCGGAGTCGTCGTCTTCCCCGACGGCCGACCTGCCGTCGGCGTCGACGTCGCGCTTGCGACACGCGATCACCAGGTCTCCCTGCGAAACGGACGCTTCCTGGGGCACGACCACTCGGCCGCCATCGTGAAAACCAAAGACGACGGGCGATTCACTGTCATCGCGCCGGACGACACGTTCCTGCTGGTGACCGCAGGCGAGGCCGGGTACGCCGACGCCTTCTCCGAGGAATTCGAGAAGTCGCACCGGCTCGTGCTGCAAGCGTGGGGGAGCGTCGAGGGACAGATCATGATCGGCAAGCGTCCGGGTGCCGGCCAGCAGGTCATGTTTGAACCATTACGTAACGATCGGGCAAATGTCCTCTACGTCTACAACCATGATCAGATCAGGGCCGACGACCAGGGCCGCTTCCGCTTCGCTGCGGTGATGCCGGGCGCAGGGCGAGTCTCTCGGGTGGTAGACACCGACCGGGGCGAGGGGCGAATGATGTCCAGCATCGGCTGGGCAACGCCCGTCGAGGTGGAGTCGGGGAAGACGGCCCGGGTCACGGTCGGCGGCAAGGGGCGGCCAGTCGTTTGCCAGGTTACCCTGGAAGGCACGACCGAATACCCCATCAACTGGCGATCGAACCAGCCGGCGGTGATCGCCCCGATCCGGGGCGAACAGAACGACGGGCCCCTGGTCTGGACCCAATATGTCGGGAACATCGGTGCCGACGGCAAGGTGAAGATCGACGACGTCCCCCCTGGCCGCTACGAGCTCACAATCCCCGTGGACGCCCCCAACGGCCCCAGTGGCGGGATCGGGTCGTTGATCGGAGAAGGCCGCCACAAGATCACCGTGCCCGATACTCCTGGCGACACACCTGTCGACCTGGGCCCGATCACGGTGACGCTCTTCCCCACTCTCAAGGTCGGCGACGAGGCACCCGAGTTCACCGTCCAGCAGCTCGCCGGCCCCGAACGCATTCGCCTCAAGGACCTGGCGGGCAAGCTCGTCCTGCTCGACTTCTGGATGAGGTGGAGCAGCCCTAGTCTCGAGGAGATCCCGAACCTCAAGGAGATCCACAAGACCTTCGGCGACGACCCCCGATTCGTCCTCGTCGGCCTCAACTGCGACCAGTCTCCCGACTATGCCGCGAAGTACGTCGCAAAGAATGAACTGACCTGGATCCAGGGGTTCAGCGGCTACCTCGGCGAACGCCTCACCCAGAACTACAAGGTCTCCGCGATCCCGGCGACGTTCCTGATCGGGCCGGACGGGCGGATCCTCGCGAGGAACCTGCGAGGCCCCGCGCTCAAGGAGGCCGTCCGGGCCGCGCTGAAGGACTCGGCCCTCTTCGCCAGGGCGGACAAGGCAACCCGATCCCCCCGGTTCCCGATCGCGCGTTTCGAGGTTCCCGACCCCAATGCGAAGCCCGCGACGGCCCCGCCCGCCGTCGCCGTCCTGGACGACGCCGATGAGGACTTCGAGGCAAAAGGTCCCCATCGCGACGGTCTCCGCCTGCTCGACGAGGCCGGCAAGGAGATTGCCTATCTCCGCGAATTCAACACGTGCCAGACCGTCGGCGCAAACCACGGCGTCGTGATCGACGCGCCTCGGGGGCGGATCTACGCCCGCGAGCTCGTCGGCCGACGTGTGACGGCCCTCGACTTCCGCGGCCGGAAGCTCTGGCAAGCCGCCGAAATCGACGCCGATGCCATGGCGGTCGACCCGAAGACCGGCCATCTCTGGTGCTCCGGCGGCGATAGCCTCGACGTGGGCGAGACCGTCGTCCTCGACCCCGAGGGCCGAGAGGTCACGAGCTTCCCGGTGCGCGGGGTCGACCTCGCCTACGACGCCCATTCCGACGCCTTCTGGCTCGTCGGCTACGGGATCAGGAAGCTCGACCGCGACGGCAAGGTCCTCTTCCAGAAGCCCCACGAGGGCTGGGCCAACGTCTCGGTCGCGACCGACCCCCGCGACGGCAGCGTCTGGATCGCCGAGCGCGACCACCCCGACGTCGCCCGGAGCGCGAACCGCCTCTGGCACCTCGACGCCCAGGGCGCGCCGATTAAGTCCTGGGAACTCGGCAAGAAGGATCCCTTCGGCGTCGCCTGCGACCCGAAGACCGGGATCGCCTGGGTGGTCGGCTTCCGCTCCGAGGTCCTCCGCTTCGCCCCCGACGGCCGGGAGCTCCCCCCCTTGCCGATCAAGGCCGTCGCCATCGCCATCAGCCCGACCAACGGACAGGTCTGGGTCACCACCGAAACCAGGATCGTCCGCATCGCCCCCGACGGCCAGATCACGGCCCCCAACATCATGATGCGGGCGCCGTCGCACCAGTCCTGGCTGACCGCATTTTAG
PROTEIN sequence
Length: 1222
MNVFTILPDVAEALTIAPTALVLVAKWTVLLALAWLVHLRLEGRNPRWRVALWRSAIVGVLLVALLSGLPPLLEWRLAREERPQASLVATLEPEPITSPGQEPRPRSAGEVRPADTAPRFNSRAVSTDRIPSTAVGLGSNGPTPRRDEVDGAKARAGGGTIHSRETWTRWLAPGLMTAWALGALVLAARLTLASLRLSSLIRRSAEAPEWVVRECRDIAGRMGIAREIRVRRSAEVGTPCLAGAWRPVLLLPDRQCREGERDDLEAILAHELAHARGHDLAWNDAAHLATLPLWFHPLAWRIRDAHASACDAVSDAVAADYLGDVASYCRTLARLALRVALPPSSRGLAMAHASEVLGRIETLNRKVFPAPLPRRPVMAALFSTSVLVVLIGGLAVTRAEPVEDAAKTPAPTAIEVAAPDGPAPLPRERERTGPEVTRELSGVVVFPDGRPAVGVDVALATRDHQVSLRNGRFLGHDHSAAIVKTKDDGRFTVIAPDDTFLLVTAGEAGYADAFSEEFEKSHRLVLQAWGSVEGQIMIGKRPGAGQQVMFEPLRNDRANVLYVYNHDQIRADDQGRFRFAAVMPGAGRVSRVVDTDRGEGRMMSSIGWATPVEVESGKTARVTVGGKGRPVVCQVTLEGTTEYPINWRSNQPAVIAPIRGEQNDGPLVWTQYVGNIGADGKVKIDDVPPGRYELTIPVDAPNGPSGGIGSLIGEGRHKITVPDTPGDTPVDLGPITVTLFPTLKVGDEAPEFTVQQLAGPERIRLKDLAGKLVLLDFWMRWSSPSLEEIPNLKEIHKTFGDDPRFVLVGLNCDQSPDYAAKYVAKNELTWIQGFSGYLGERLTQNYKVSAIPATFLIGPDGRILARNLRGPALKEAVRAALKDSALFARADKATRSPRFPIARFEVPDPNAKPATAPPAVAVLDDADEDFEAKGPHRDGLRLLDEAGKEIAYLREFNTCQTVGANHGVVIDAPRGRIYARELVGRRVTALDFRGRKLWQAAEIDADAMAVDPKTGHLWCSGGDSLDVGETVVLDPEGREVTSFPVRGVDLAYDAHSDAFWLVGYGIRKLDRDGKVLFQKPHEGWANVSVATDPRDGSVWIAERDHPDVARSANRLWHLDAQGAPIKSWELGKKDPFGVACDPKTGIAWVVGFRSEVLRFAPDGRELPPLPIKAVAIAISPTNGQVWVTTETRIVRIAPDGQITAPNIMMRAPSHQSWLTAF*