ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_182149_34

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 45229..45711

Top 3 Functional Annotations

Value Algorithm Source
Transposase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UN29_MYXSD similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 149.0
  • Bit_score: 124
  • Evalue 9.30e-26
transposase similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 149.0
  • Bit_score: 124
  • Evalue 2.60e-26
Transposase {ECO:0000313|EMBL:AGC47869.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 149.0
  • Bit_score: 124
  • Evalue 1.30e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Myxococcus stipitatus → Myxococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGCGCAACGTCGCCAGCCTGCCGCACCGCTACGATGAGCCGCCGGCCCTCTCGCTGTTCGACCCGGCCCGGCTCCGTCGCGTCACCACCGAGGCCGGGCGGGTGATCCTGGCCATCGATGGCCTCCAGCCCGACGTCGGCCACAGGGCCCTCCGGGTCATCCGCGAGGTGTTCTCCGGCGAGGTCCTCATGGCCAGGAGGCTGCACAACTACGGCCGGGCCTACTTGACCAAGCTGCTCGGCCAGGTCAGAACCATCCTCCAGCCCGAGGGGGCCGCTGGCGGATCGATCCTCGGTGCGATCTCCGCCGGCCAGCATTGCATCAGTGACGCCGTGGCACTGGCTCTGCCCGACGTTTCGAACCAGGTCCGCCAGTTCCACTACCTCCTCGAGGCCGCCCGACCGGTGTACGAGGCCGGCCGCCACGCCATGGCCTTTCTAAGGAGAAGGCCCGGGACATCCGCCCGATCGAGTGGGCCATGA
PROTEIN sequence
Length: 161
MRNVASLPHRYDEPPALSLFDPARLRRVTTEAGRVILAIDGLQPDVGHRALRVIREVFSGEVLMARRLHNYGRAYLTKLLGQVRTILQPEGAAGGSILGAISAGQHCISDAVALALPDVSNQVRQFHYLLEAARPVYEAGRHAMAFLRRRPGTSARSSGP*