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berkeley_reactor_200306_planktonic_scaffold_190938_1

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 2..508

Top 3 Functional Annotations

Value Algorithm Source
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 168.0
  • Bit_score: 295
  • Evalue 3.40e-77
GDP-L-fucose synthase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DM68_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 168.0
  • Bit_score: 295
  • Evalue 2.50e-77
nucleoside-diphosphate-sugar epimerase similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 168.0
  • Bit_score: 295
  • Evalue 6.90e-78

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 507
TACAAGCGGCAGTACGGGCTCGACTCGATCCACCTGATCCTGACGAACCTGTACGGCCCCGGCGACTCGTACAACCCCGACCGCTCGCACGTCGTGGCGGCCCTCGTCCGCAAGTTCGTCGAGGCCGAGCAGGCCAAGGCGCCGACCGTCGAAGTCTGGGGGACGGGCAAGCCCATCCGCGAGTTCATCTACGTCGAGGACTGCGCCGACGCGATCGTCCTGGCGGCCGAGCGTTACGACGACGCCGGCACGCCCCTGAACATCGGGACGGGACGCGGCACCTCGATCCGGGAGCTCGCCGAGACGATCCACGCGGTGTCCGCCTACGGCGGGACGGTGTCCTGGAACACCGAGAAGCCCGACGGCGCCGCGAAGAAAGTCCTCGACGTCACACGCATGAAGCAAGTTCTCGACGGCTGGACGCCGCCGACCGACCTTGAGGCCGGATTGACCAAGACCATTGCCTGGTATCGGGCCAACAAGGCCCAGGCGGACACAAAATGGTGA
PROTEIN sequence
Length: 169
YKRQYGLDSIHLILTNLYGPGDSYNPDRSHVVAALVRKFVEAEQAKAPTVEVWGTGKPIREFIYVEDCADAIVLAAERYDDAGTPLNIGTGRGTSIRELAETIHAVSAYGGTVSWNTEKPDGAAKKVLDVTRMKQVLDGWTPPTDLEAGLTKTIAWYRANKAQADTKW*