ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_190938_6

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 7285..8112

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding domain-containing protein, AraC-type n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGR3_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 275.0
  • Bit_score: 356
  • Evalue 1.90e-95
DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 275.0
  • Bit_score: 356
  • Evalue 5.40e-96
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:AGA27998.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 275.0
  • Bit_score: 356
  • Evalue 2.70e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 828
ATGGCGACCAAGCTCTCCCCGGGCACCTTCTTCGGGCGGACGCAGAAGAAGATCGAGGTCGGGGGCCTGACGTTCGCCGAGTCGGTCTACGCCGGGGGGGAGGAGCTCTACCTCCCGCCCCACGCCCACGAGGATGCGTTCCTCCACTTCATGATCGAGGGCGTCTGCGAGGAGGTCTACGGCCGAGAGACGCGGGTCCGGTCGTCCGCGACCTTGGCGTTCCACCCGGCCGGCGAGCCGCATTCGAACCGATGGCACGAGGCCGGGGGGCGAGTCTTCCACGTCGACCTCTCCGACGCCCGGGCCGAGGCGATCCGCGAACACGCGCCCGCCCTCGATCGACCGGCCGAGCTCCCGGGAGGCGTGGCCCCCTGGCTCGCGGCCCGGCTCTACCGCGAGTACTGTCGACCCGACGGCGCCTCCCCCTTGGCCCTCGAGGGGCTGGCCCTCGAGATCTTCGCCGAGGCGTCGCGCGACCCCGCGCCTCCCGGCGACAAGACGGCCCCGCGCTGGCTCCACCGAGTCCGCGACCTGCTCCACGACCGTTTCGCGGACGCCGTCTCGTTCGACGAGATCGCGAACGCGGTCGGCGTCCACCCGGTCCACCTCGCCCGCACGTTCCGTCGCCACTACGGCTGCACCCCGGGCGAGTATCTCCGCAGGTTGCGAGTCGAGTTCGCCTGCCAGAAGCTCGCGACCTCCAGCACTCCCCTCGCCGAGCTCTCCCTCGCCGCCGGGTTCTCGGACCAGAGCCACTTCACCAGGACGTTCCGCCACCAGATGCAGATGACGCCGGGCGAATTCCGTCGCCACTTCCGGGCGCGCTAA
PROTEIN sequence
Length: 276
MATKLSPGTFFGRTQKKIEVGGLTFAESVYAGGEELYLPPHAHEDAFLHFMIEGVCEEVYGRETRVRSSATLAFHPAGEPHSNRWHEAGGRVFHVDLSDARAEAIREHAPALDRPAELPGGVAPWLAARLYREYCRPDGASPLALEGLALEIFAEASRDPAPPGDKTAPRWLHRVRDLLHDRFADAVSFDEIANAVGVHPVHLARTFRRHYGCTPGEYLRRLRVEFACQKLATSSTPLAELSLAAGFSDQSHFTRTFRHQMQMTPGEFRRHFRAR*