ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_190938_26

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 35036..36616

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4D84 similarity UNIREF
DB: UNIREF100
  • Identity: 33.7
  • Coverage: 523.0
  • Bit_score: 242
  • Evalue 7.70e-61
permease similarity KEGG
DB: KEGG
  • Identity: 29.4
  • Coverage: 524.0
  • Bit_score: 209
  • Evalue 1.60e-51
Permease {ECO:0000313|EMBL:ADB15928.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.4
  • Coverage: 524.0
  • Bit_score: 209
  • Evalue 7.80e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pirellula staleyi → Pirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1581
ATGGTTCTGAATGGGGAGGAGATCGTGGGGGGCGCCGTGCTGAGGACGATCCAGATCGTCGTCGAGTCGTCCCAGTATCTCTTGACGGGATTCGTGACCGCCGGCGTCCTCCGAGGCGTGGTCGGCCATGCCCGCCTGAGGGCGTTCCTGAGCTCGGGACGGTGGGCAGGGCCGCTCAAGGCGTGGCTGGCGGCCCTGGCGTTGCTGCCCGTCTGCGCCCTGGGAGTCTTGCCGGTCCTCGGCGAGCTCCGACGGGCGGCCGTCCCCCGGCGGATGATCCTGACGTTCGCCCTGGCCGCGCCGGTGCTCAACCCCGTCTCCCTCATGTTCGGGGTCTCTTATCTCGGGCTCCCGTTGCTCGCGATGCTGCTCGCCGGCCTCTTCGTCGTCTCGGTGGGCGTCGGCGAGATCTGGGCCGGCCTCGGCCCGCGGTCGGATCCGGAGCCGGCGGCAGGGCTTGATCCCGAGCCCTTGCCCGCGACCGGCCTGGGGCGTCTCTCCGCGTCAGCGATCCATTCCGCCCGAGTGGCGACCGGGCCCGTGCTGGTCGACGTCGCCGCGGGGGTCCTGGGGGCGGCCGTGCTCGCGTCGTTGCTGTCGCCGACGTTCCTGGCCGACACCATGTTCGTCGGCGATCCCCGGGCGATCCCGACGATGGCCGCCGTCGCGCCCTTGAGTTACCTCACGCCCGACCAGGGGATCACGGCCATCCCGGAGATGGTCAAGTTCCGCCAGTCGCCGGGGGCGATATTCCTGCTCCTTACCCTCGGCGTCGGGGTGACCCTCGGCCATTTCACCTGGATCGGGCGGAACGTCGGCCTCCGAGCGCTCGCGTTGTGGACGGCCCTGGTCCTCGGTCTCTCGATCGGCTGGGCCTATGCCGTCGACCCGCTGATCTCACCCGTCGGCACCGTCAACGCCGACAACGACCACTTCGGCCGCCTCGCGAATCCCTACCCTCCGAACGAAGGGCTCGCCGGACTCCCTGCCAAGATCGGGCGTGAGCTCCAGGATGCCAGCGCCTTCCGGCTCATCGCGACCGGTGCCCTCGCGGCCTTGATCCTCGGTGGCGTCGCGTGCCGGAGGGTCGGCGATCGGCTTTCGTTCGAAGCCTACGCGACGCTCCGACCCGCCGATCCGATCCTCGACGCCACCGTCGCCTCGCCGTCGATTTGGAGTCGAGAGTTGCCGAAGTCGTGGGGCAGGGGGCTTGCCGGGTTTGGTGGGCTCGCCGTCCTCCTTGCGGGGGCGTTTGCGTACTATCCAAGCCCTTTCGAAGTGTTCCAGGACATCCAGATCGTCAAGGCCGACTTCTACGGCGAGCTCGGTTCCAGGGACCGTGCCACTCCCCTCTATCACCTTGATCTCTGGGATCGACTCGTCGACAAGCTCCCCCTCGGGGCCACGATCCGCCTCCAACCCCCAGGAACCGATTCACTTCGCCAAACCCGAGAGCTCCACGACGCGATCCGCTCCCTCCGCCTCGCACTCCAGAAAGGGGAGATCGGTGAGGCCAAGTCGATCTTTCTGAAGGCGCAACGAGCCACGGACGGTTGCCGGCGATCCTATCTCGGGCCTTGA
PROTEIN sequence
Length: 527
MVLNGEEIVGGAVLRTIQIVVESSQYLLTGFVTAGVLRGVVGHARLRAFLSSGRWAGPLKAWLAALALLPVCALGVLPVLGELRRAAVPRRMILTFALAAPVLNPVSLMFGVSYLGLPLLAMLLAGLFVVSVGVGEIWAGLGPRSDPEPAAGLDPEPLPATGLGRLSASAIHSARVATGPVLVDVAAGVLGAAVLASLLSPTFLADTMFVGDPRAIPTMAAVAPLSYLTPDQGITAIPEMVKFRQSPGAIFLLLTLGVGVTLGHFTWIGRNVGLRALALWTALVLGLSIGWAYAVDPLISPVGTVNADNDHFGRLANPYPPNEGLAGLPAKIGRELQDASAFRLIATGALAALILGGVACRRVGDRLSFEAYATLRPADPILDATVASPSIWSRELPKSWGRGLAGFGGLAVLLAGAFAYYPSPFEVFQDIQIVKADFYGELGSRDRATPLYHLDLWDRLVDKLPLGATIRLQPPGTDSLRQTRELHDAIRSLRLALQKGEIGEAKSIFLKAQRATDGCRRSYLGP*