ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_218273_33

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(36819..38294)

Top 3 Functional Annotations

Value Algorithm Source
Probable glycine dehydrogenase (decarboxylating) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00713};; Glycine cleavage system P-protein subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine decarboxylase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine dehydrogenase (aminomethyl-transferring) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 486.0
  • Bit_score: 850
  • Evalue 1.10e-243
Probable glycine dehydrogenase (decarboxylating) subunit 2 n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKW6_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 486.0
  • Bit_score: 850
  • Evalue 7.60e-244
glycine cleavage system protein P similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 486.0
  • Bit_score: 850
  • Evalue 2.10e-244

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1476
ATGTATAAACTCGACCCGCCTTCGCTCCTCTTCGAATCGAGCCGCCGGGGGCGTAAGACCTCGTACTTCCCCGCCGCCGACGTCCCCGATCGCGCGATCGGCGACCTGATCCCGGACGCGCATCGATCCGGGGAACTCCCCCCCCTGCCCGAGCTGAGCGAGCTCGACGTGGTCCGTCACTACACGAACCTGTCGGCCTCGAATATGTCGATCGACTCGAATTTCTATCCGCTCGGGTCCTGTACCATGAAGTACAACCCGAAGCGGAACGAGCGGCTCGCCGGCCTGCCGGGCCTGGGGGCCCAGCATCCCTATCAGGACGAGAGCACGCTGCAGGGGATGCTCGCGATCCTGTACGACCTCCAGCAGATCCTCGCCGAGATCGCCGGTCTCGACGCGGTCAGCCTCCAGCCCGCGGCGGGTGCGCACGGCGAGCTGACCGCCCTGTTCGTGGCCGCGGCCTACTTCCGCGACCGCGGGGAGACGAGGACCAAGGTCCTGATCCCCGACAGCGCCCACGGGACCAACCCGGCGTCGGCCCACCTCGCCGGATTCGACGCCGTGACGATCAAGAGCGACTCCCGAGGGCTCGTCGACCTGGCCGACTTCAAGGCCAAGCTCGACGACTCCGTCGCCGTGTTCATGATCACCAACCCGAACACGGTCGGCCTGTTCGACCCCCAGGTGGGCGAAATCGCCCGCCTGTTGCACGAGCGGGGGGCCCTGCTCTATCTCGACGGCGCCAACATGAACGCGATCCTCGGCGCGGTGCGGCCCGGCGACATGGGGGCCGACCTCATGCACTACAACCCGCACAAGACGTTCTCGGGCCCCCACGGCGGCGGCGGCCCCGGCGCCGGCCCGATCGCCGTCCGGGCGCAGCTTGCCCCGTACTTGCCCGCCCCCCTCGTCGCCCGCAACGAGGATGGGACGTACCGGCTCGACTTCGACCGGCCCAAGTCGATCGGGCGGGTCCGTTCGTTCTTCGGCAACACCGGGGTCCTCTTCCGCGCGTATTGCTACATCAGGACCCAGGGGCCCGAGGGCTTGAAGCGGATCGCCGAGCACGCCGTGCTGAACGCCAACTACGTGAAGGCGCTCGTCCGGGACATCTACCCGGTCCCGTTCGGCGACCGTTGCATGCACGAGTTCGTCGCCTCGGCGCGGGGCATGGCCCGCGACCGCGGCGTCCGGGCCATGGACATCGGCAAGCGGCTCATCGACTACAATATCCACGCCCCCACGGTCTATTTCCCCCTGATCGTCCCCGAGGCCCTGATGATCGAGCCGACGGAGACCGAGAGCCGGGAGACCCTGGAGGCCTTCGCCAAGATCCTGCGGACCATCGCCGAGGAGGATCCCCAGACGCTCCACGACGCCCCGGTCTCCACCCCGATCAATCGGCCCGACGAGGTGAAGGCGGCGAAGAGCCCGATCCTGAAATGGACCCCGGCCGAGGCGGCCTCCGCCGGTTGA
PROTEIN sequence
Length: 492
MYKLDPPSLLFESSRRGRKTSYFPAADVPDRAIGDLIPDAHRSGELPPLPELSELDVVRHYTNLSASNMSIDSNFYPLGSCTMKYNPKRNERLAGLPGLGAQHPYQDESTLQGMLAILYDLQQILAEIAGLDAVSLQPAAGAHGELTALFVAAAYFRDRGETRTKVLIPDSAHGTNPASAHLAGFDAVTIKSDSRGLVDLADFKAKLDDSVAVFMITNPNTVGLFDPQVGEIARLLHERGALLYLDGANMNAILGAVRPGDMGADLMHYNPHKTFSGPHGGGGPGAGPIAVRAQLAPYLPAPLVARNEDGTYRLDFDRPKSIGRVRSFFGNTGVLFRAYCYIRTQGPEGLKRIAEHAVLNANYVKALVRDIYPVPFGDRCMHEFVASARGMARDRGVRAMDIGKRLIDYNIHAPTVYFPLIVPEALMIEPTETESRETLEAFAKILRTIAEEDPQTLHDAPVSTPINRPDEVKAAKSPILKWTPAEAASAG*