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berkeley_reactor_200306_planktonic_scaffold_223806_5

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 3817..4395

Top 3 Functional Annotations

Value Algorithm Source
bacteriocin n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5690 similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 183.0
  • Bit_score: 224
  • Evalue 6.10e-56
redoxin similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 196.0
  • Bit_score: 201
  • Evalue 1.60e-49
Redoxin domain protein {ECO:0000313|EMBL:ADG68346.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 196.0
  • Bit_score: 201
  • Evalue 7.70e-49

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 579
ATGGAAAGGCAACGTGCTTTGCGGTTTCCGGTCGGGATCCTCGGCCTGGCTGTCGCGATCGGTGTGGCGACGGCGATTCCGGGCCGGGTCGCCGAGGCGGCCCCGAAGGTCGGCGAGCCGGCGCCGGACTTCGAGTTGAGCTCCGTCGCGGGAGAGAAAACCAAGTTGTCGAAACTGGCCCAGCAGGGGCCCGTCGTCGTGGTGGTCCTGCGCGGATACCCGGGGTATCAGTGCCCGATCTGCAACGTCCAGGTCGGGGAGCTCCTGGGGAAGGCCCGAGAATTCCAGGCGGCGAAGGCGAACGTGGTCCTGATCTACCCCGGGCCCTCGGACGCCCTCGAGGAGCACGCCTCGGAGTTCGTCCGCGGGAAAAAACTGCCGGAGAATTTTCATCTCCTGATCGATCCCGGCTACGCGTTCACCGATCGATACGGCCTGCGCTGGGATGCGCCGGGAGAGACGGCTTATCCGGCGACCTTCGTGATCGGCACGGATCGGAACGTTCGCTTTGCGAAGATCAGCGGGTCCCACGGGGGTCGGTCGAAGGCGAGGGAGGTCCTCGGGGCACTGGCGAAGTGA
PROTEIN sequence
Length: 193
MERQRALRFPVGILGLAVAIGVATAIPGRVAEAAPKVGEPAPDFELSSVAGEKTKLSKLAQQGPVVVVVLRGYPGYQCPICNVQVGELLGKAREFQAAKANVVLIYPGPSDALEEHASEFVRGKKLPENFHLLIDPGYAFTDRYGLRWDAPGETAYPATFVIGTDRNVRFAKISGSHGGRSKAREVLGALAK*