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berkeley_reactor_200306_planktonic_scaffold_227200_40

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(57155..60640)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DIJ9_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 539.0
  • Bit_score: 536
  • Evalue 4.40e-149
PAS domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 539.0
  • Bit_score: 536
  • Evalue 1.20e-149
PAS domain S-box {ECO:0000313|EMBL:AGA28643.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 539.0
  • Bit_score: 536
  • Evalue 6.10e-149

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 3486
ATGGACCGCATGACGCGTGCGACATTCGCCGCCGGATATCTCTTCGTCATCGCGGTCCTCCTCGTCGACGCCCTCCTCGTTGCCGCCAGCGTGCGGACGATCCTCCGGAGCTACGAGCGCGTCGACAACGCTCGCCAGGTGGTGGCCGAGCTCGAGCACACCTTCGCCATCCTCAAGGACGCGGAGACGGGTCAGCGCGGGTTCCTGCTGACGGGGCGGGACTCCTATCTCGAGCCCCTCCACACGGCGGAGGCCCGGTTCAACGAGGGGCTTGGCCGACTCGAGCGTCTGACGAAGGAGAACGCAAGGCAGCGCGACCTCATCGCCGATTTGCGGGTCCTGACGGCCGTCAAGATGGCCGAGCTGCGACAGACGGTCGAAATCCGCCGGGCCCGGGGGCTGCAGGACGCTCTCGAGGTCGTCCTGACCGACCGCGACAGGGAGGTCATGGAGAGGATCGTCCGGGTCGCGGCCGATTTCCGGGGGGAGGAAGACCGGCTCCTGATCGTCCGCACGGCGGCGGCTCGGCAGGCCGTCCGACGACTGGTCCTGACGTTTTCCGCGACCACGGGCGCCGCGATCATCCTCCTGTTCGCGGTATTCCTCCTCCAATGGCTCGAAGGTTCGGTCCGGGAGAAGGCCGAGTCGGCGCTCAAGCGGAGCGAAGCCTGGTTGTCCACGACGCTCGCCAGCATCGGGGATGCGGTCATCGCCTCCGACGACCAGGGGCGTGTTCGACTCATGAACCCCGTCGCGTCCGGGCTCTCGGGTTGGCGCCCCGACGAGGCCGAGGGCCGGCCGTTGGACGTCGTCTTCACGATCATCGACGAGGCGACTCGCCGGCCCTCGGAGAATCCCATCGGTCGCGTGATCGGGGAAGGACGGACCCTCGCCGACGCGAATCCCACCTTGCTGGTCGCCAGGGACGGGACCGAGACCTCGATCGAAAACTGCGCCGCACCGATCAAGGATGAGGACGGCAAGATCGTCGGCGTCGTCCTGGTGTTCCGCGACACCACCGAGCGGAGGCGACAGGACGCCTTCCGCGATGAGCAGCGTCGGCTGGCCGAGTTCGGTCGCGACATGGGCTTCGCGCTCTCCGGCGAGGGGACGCTGCCCGAGATCCTCGGCCGATGCACTCAACTGACCGTCGGGTGTCTCGACGCCGCGTTCTCCGGGATCTGGACGGTCGCCGAATTGGGCCGTGTCGAGCTCCAGGCGAGCACCAACGTCGGCACCGAGGCCGAGGACGCCCACCAACGGGTCCTCGTCGGCGAGCCCGAGCTGCGACGGATGGTCGAAGACGGCCATCCGTATCTCTCGAACGACGTCCCTCACGACCCTCGTGTTCCCGCGAGCGATTGGGCCGGGCGCGAGGGGATCGTCGCGTTCGCGGGATTCCCGCTCGTCGCCGATGGAGAGCCCCTCGGCCTCTGGGCGACCTACTCGCGCCGCGCCTTTTCCGAGGCCACGCTCTTCGCCATGGCCTCGGTCGCGCGAGTGATCGCCCTGGGGGTCGAACGGAAGACGTACACCCAGGCCCTCACGGAGAGCTCGGCCTGGCTCTCGACGACGCTCGCGAGCATCGGCGATGCCGTGATCGCCACCGACGAGCTCGGGCGGGTCCGGTTCATGAACCCGGTGGCCGAGTCTTTGACCGGATGGTCGCAGGACGAAGCGGCCGGGCGGCCGTTGCTCGAGATCGGCACGATCCTCGAGGAACGCACGCGCCAGGTCACCCCGAGCCCGATCGAGCGGGTCCTACGCGAGGGCGCCGGCGTCGGATTCGCCGATCACTCCGTGTTGGTCGCCCGAGATGGCCAGGAGCTGCCGATCGAGGTCAATGCCGCCTTGATCCGTGATGGCTCGGGCCGGGTGTCCGGCGTGGTCATGGTCTTCCGAGACGTCACCGAGCGTCGTCGCCAGGAGGACGCGATGCGTCGGAGCGAGGACCGTCTCCGCTTGGCGATCGAGTCCGGGGAGCTCGGGACCTGGGAGATGGACCCGGCGCTCGGCACGGTGCTCTGCGACGATCGGAGCCGGGCCCTCCTCGGGTTCTCCGCGGACGACCCCGTGGATTATGGCGTGTTCCTCTCGGCCGTACATCCCGACGATCGCCCGACGGTCGACCAGACGCTCCGGGCGGCCATCGGACCGGCCGGCGCGGGCGAGCTCGATCTCGAATTCCGGACCGTCGGGCTGCGAGACGGCGTCGAACGTTGGCTCTCCTCGCGAGGACGACGATCCTTCGCCGGGGCCGGGCGTTCGCCCAGGCTGTCCGGGACGATCCTGGATGTCACCGACAAGAAGCGCGGTCAGGACGAGTTGCGGCTCGCCAAGGAGGCGGCCGAGGACGCGAATCGGGCGAAGGATCAGTTCCTCGCGGTCCTCAGCCACGAGCTCCGGACGCCGCTCAACCCCATCCTGCTGGCCGTCACCTCCATGCTCGAGCGCCCGGAGGGCGCCGAGGAGTTCCGGACGAATCTCGAGATGATCCGCCAGTACGTCGGCCTCCAGGCCCGCTTGATCGATGACCTCCTCGACGTGATGCGGATCGTGCGCGGGAAGATGCCGTTCCACTGGGAAGTGACCGACTGCAACCAGTTGATCGAGCGTGCCGTCGAGGTCTGCCGGAGCGAGTTATTGGGGAAGGAGCTGCGGCTCGAGTTGGACGTCGCCGCGAAACGGCGGCACGTCAACGCCGATCCCGCACGCCTCCAGCAAGTCTTGTGGAACCTGGTCAAGAACGCGGTGAAGTTCACGCCCCGGGCGGGGCTGATCACGATCCGGACCCGCAATCGGGTCGACGAGGCGACGGGCCTCGACCTCATCGTCTTCGAAGTCGAGGACACGGGCATCGGCATCGACCCGGCGGTCCTGTCGACGATCTTCGACCCGTTCCAGCAGGGCGAGGTCTCGATCACGCGCAAGTTCGGCGGCCTGGGCCTCGGCCTGGCGATCAGCAAGGGGATCATCGAAGGGCATGGCGGTGTCCTGACCGCCGAGAGCGGGGGCCATGGCCAGGGGGCGACGTTCCGGATCGAGCTGCAAACGTTGACGTCCCCGGGGCCCGACGACTCCGAGACGTCGGGATGCCCCGCCGATTCGTCCGAGGCCGCCCCCTTGGTCCGGCGAAAGATCCTCCTCGTCGAGGATGAGCCGGCCACGCTCAGGCTCCTGGCCAGGCTCCTCCGGGGGCTCGGGCACGAGGTGACGGCGACCGGGACCATCACGTCGGCCCTGGAGGCGGAGGCCGAAGGGGATTTCGACCTCATCATCAGCGACATCGGCCTCCCGGACGGGAGCGGGCTGCGGCTGATGCAGCAAGTCGTCGCCCGTCGCGGCCCCGTCTCGGCGATCGCCCTCACCGGATACGGGATGGAAGAGGACATCCGGCAAAGCCGAGACGCCGGCTTCCTTGCTCATATGACCAAGCCGATCGACTTTGCTAAATTACAGGCGTTGATCCGTCAAATGACATCCTGA
PROTEIN sequence
Length: 1162
MDRMTRATFAAGYLFVIAVLLVDALLVAASVRTILRSYERVDNARQVVAELEHTFAILKDAETGQRGFLLTGRDSYLEPLHTAEARFNEGLGRLERLTKENARQRDLIADLRVLTAVKMAELRQTVEIRRARGLQDALEVVLTDRDREVMERIVRVAADFRGEEDRLLIVRTAAARQAVRRLVLTFSATTGAAIILLFAVFLLQWLEGSVREKAESALKRSEAWLSTTLASIGDAVIASDDQGRVRLMNPVASGLSGWRPDEAEGRPLDVVFTIIDEATRRPSENPIGRVIGEGRTLADANPTLLVARDGTETSIENCAAPIKDEDGKIVGVVLVFRDTTERRRQDAFRDEQRRLAEFGRDMGFALSGEGTLPEILGRCTQLTVGCLDAAFSGIWTVAELGRVELQASTNVGTEAEDAHQRVLVGEPELRRMVEDGHPYLSNDVPHDPRVPASDWAGREGIVAFAGFPLVADGEPLGLWATYSRRAFSEATLFAMASVARVIALGVERKTYTQALTESSAWLSTTLASIGDAVIATDELGRVRFMNPVAESLTGWSQDEAAGRPLLEIGTILEERTRQVTPSPIERVLREGAGVGFADHSVLVARDGQELPIEVNAALIRDGSGRVSGVVMVFRDVTERRRQEDAMRRSEDRLRLAIESGELGTWEMDPALGTVLCDDRSRALLGFSADDPVDYGVFLSAVHPDDRPTVDQTLRAAIGPAGAGELDLEFRTVGLRDGVERWLSSRGRRSFAGAGRSPRLSGTILDVTDKKRGQDELRLAKEAAEDANRAKDQFLAVLSHELRTPLNPILLAVTSMLERPEGAEEFRTNLEMIRQYVGLQARLIDDLLDVMRIVRGKMPFHWEVTDCNQLIERAVEVCRSELLGKELRLELDVAAKRRHVNADPARLQQVLWNLVKNAVKFTPRAGLITIRTRNRVDEATGLDLIVFEVEDTGIGIDPAVLSTIFDPFQQGEVSITRKFGGLGLGLAISKGIIEGHGGVLTAESGGHGQGATFRIELQTLTSPGPDDSETSGCPADSSEAAPLVRRKILLVEDEPATLRLLARLLRGLGHEVTATGTITSALEAEAEGDFDLIISDIGLPDGSGLRLMQQVVARRGPVSAIALTGYGMEEDIRQSRDAGFLAHMTKPIDFAKLQALIRQMTS*