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berkeley_reactor_200306_planktonic_scaffold_230826_28

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(33339..33674)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=2 Tax=Cyanothece RepID=G6GZB9_9CHRO similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 105.0
  • Bit_score: 105
  • Evalue 1.80e-20
putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 105.0
  • Bit_score: 105
  • Evalue 5.20e-21
Putative transcriptional regulator {ECO:0000313|EMBL:ACB52184.1}; TaxID=43989 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain ATCC 51142).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 105.0
  • Bit_score: 105
  • Evalue 2.60e-20

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Taxonomy

Cyanothece sp. ATCC 51142 → Cyanothece → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGTCAATTCGATTAGAGGATTTCATCGCCGGGCTTCCCGAGAAGGACCAGGAGGAGATCAAGAAGCGTAGCGAAGAATTGATCGCCGAGGAGGCGACGCTCCGTCAGGTGCGGGACGCCCGCGAGCGGTCGCAGCAGGCGATTGCGGAGAAGCTGAACATCAAGCAGGCGGCGGTCTCGAAGCTCGAGCGCCGCACCGACATGTATCTCAGCACCTTGCGGGGCTACATCGAGGCCATGGGCGGCGAGTTGGAGATCATCGCCCGCTTCCCCAACCAGGTCGTCCGGATCACGCAGTTCGAGGCGCTCGACCCCGGGCCGACTTCGCAGGACTGA
PROTEIN sequence
Length: 112
MSIRLEDFIAGLPEKDQEEIKKRSEELIAEEATLRQVRDARERSQQAIAEKLNIKQAAVSKLERRTDMYLSTLRGYIEAMGGELEIIARFPNQVVRITQFEALDPGPTSQD*