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berkeley_reactor_200306_planktonic_scaffold_232219_4

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(3622..5052)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 476.0
  • Bit_score: 843
  • Evalue 1.30e-241
Ribosomal protein S12 methylthiotransferase RimO n=2 Tax=Singulisphaera acidiphila RepID=L0DKX8_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 476.0
  • Bit_score: 843
  • Evalue 9.00e-242
ribosomal protein S12 methylthiotransferase RimO similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 476.0
  • Bit_score: 843
  • Evalue 2.50e-242

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1431
ATGAGCCAATCATCGGACATCAAAGGTTCGTTCTCGTTCGTCAGCCTGGGCTGCCCCAAGAACCTCGTCGACTCCGAGCGGATGCTCGGCCTCCTGGCGCAGGACGGTTACGTGCTCGTGCCGGACGCCCAGAAGGCGGACCTGGTGATCATCAACACGTGCGGCTTCATCGACGCGGCCCGTCAAGAATCGCTGGACGTGATCCGAGAGATGCTCGACCGCAAGCGGGCCGGGGCGATCAAGGGGGTCGTCGTCGCCGGCTGCCTCGCCGAACGGCAGAAGGAAATGCTGCTCGAGGAGGTCCCGGACGTCGACCAGGTCGTCGGCGTGTTCGGGCGTGAGGAGATCGCCAAGGTCGCCGACCGGATCATGGGCGACCTCCACGACCAGCGCACGATCTTCCGCCCCGCACCCATCCAGGCCCAGGAAGACCGAGCCCGGCTCCGGATCACGCCCCGGCACCTCGCGTATCTCAAGGTCTCCGAGGGGTGCGACCGGCTCTGCACCTTCTGCGCGATCCCTTACATGCGCGGGAAGCACGTGACGAAGCCCATCGAGAAGGTCGTCGAGGAGGCCCGCGAGCTCGTCCGCGACGGCGTCCGCGAGCTGAACCTCGTCGCCCAGGACATGACCTACTACGGGGTCGACCTCTACGGCCGCCCCCGGCTCGCCGAGCTGCTCCGCGAGCTCAACCAGGTCGAGGGCCTCGACTGGATCCGGGTCCTGTACAACTACCCGAACTACTTCACGGACGAGCTCTACGAGGCGCTCGCGACCTCGGACAAGGTGCTGCCGTATCTCGACATGCCGTTGCAGCACATCAACGACCGGATGCTGAAGATGATGAATCGCCGGCACACGCGTGCCGAGACGGTGACCATCATCGACCGGCTCCGGGCGACGATTCCGAACCTGGTCCTGCGGACGACCTTCATCGTCGGCTTCCCGGGCGAGACCGAGGCGGAGTTCGAGGAGTTGCTGGAGTACGTCAAGTCGGCGCGTTTCGAGCGGCTCGGCGTGTTCCCGTATTCTTACGAGCCGGACACGCCCGCGGCCAAGCTCCCGGGCCATCTCTCGGACGAGGTGAAGTCCGAACGGCGCGACCGCGTCATGGCCGCGCAGCAGGAGATCGCGTTCGCCTTCAACCAGGGGATGGTGGGCCGGCCGCTCGACGTCCTGATCGACGGGCCCGCCCCCGAGGGCAAGAACCTTTGGGTGGGAAGGACTTACGCGGATGCGCCCGACGTCGACGGCGTGACGTTCGTGCGAGGTGTTTCTCTCGAGCCCGGCGATCTGGTAGCATGCGAGGTCGTTGCGGCGGAGGGCTACGACCTGATCGCCGACGCCGGGGCCATGCCCCCTCGTCGGAAGCGGGCACGGCCCAAGCCCCGGAAGAAACCTTCGTCGTCGTCCCTGACGATCCTGAACTAA
PROTEIN sequence
Length: 477
MSQSSDIKGSFSFVSLGCPKNLVDSERMLGLLAQDGYVLVPDAQKADLVIINTCGFIDAARQESLDVIREMLDRKRAGAIKGVVVAGCLAERQKEMLLEEVPDVDQVVGVFGREEIAKVADRIMGDLHDQRTIFRPAPIQAQEDRARLRITPRHLAYLKVSEGCDRLCTFCAIPYMRGKHVTKPIEKVVEEARELVRDGVRELNLVAQDMTYYGVDLYGRPRLAELLRELNQVEGLDWIRVLYNYPNYFTDELYEALATSDKVLPYLDMPLQHINDRMLKMMNRRHTRAETVTIIDRLRATIPNLVLRTTFIVGFPGETEAEFEELLEYVKSARFERLGVFPYSYEPDTPAAKLPGHLSDEVKSERRDRVMAAQQEIAFAFNQGMVGRPLDVLIDGPAPEGKNLWVGRTYADAPDVDGVTFVRGVSLEPGDLVACEVVAAEGYDLIADAGAMPPRRKRARPKPRKKPSSSSLTILN*