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berkeley_reactor_200306_planktonic_scaffold_267214_52

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 66545..68665

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit SSL1 n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DC15_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 707.0
  • Bit_score: 1099
  • Evalue 0.0
RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit SSL1 similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 707.0
  • Bit_score: 1099
  • Evalue 0.0
RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit SSL1 {ECO:0000313|EMBL:AGA26914.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 707.0
  • Bit_score: 1099
  • Evalue 0.0

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 2121
ATGAATTTCGGGAGCCTGAGCCGCACCGGTTTCCCCGTCCAGTTCTCCACCCCGCTCGGCGGGATGGAATGGGCCGTCCTGGCGGGGATCCCCGTCGGGATCATCGCGCTCTATTTCCTCAAGCTCCGACGGCGGCCGGTCCAGGTCTCGAGCACCCTGCTCTGGAGACGAAGCCTCGAAGACCTGCACGTCAATAGCCTCTTCCAGCGGCTGCGGAAGAACCTCCTCCTGTTCCTCCAACTCCTCGCCGTCCTGCTGGCGATGCTCGCGCTGGCCGGGCCGAAGGTGAAGGGGACCAGCACGCAAGGCCAGCGATACGTCGTGACGATCGACAACTCGGCGAGCATGTCCGCCACCGACGTCAAGCCGAGCCGCCTGGCCCGAGCCAAGGACGAGGCCAAGAAGATCGTCGACGCGATGGAGTCGGACGACCTCGCGATGGTCATCAGCTTCTCGGACCGGGCCCGCGTCGTCTCCAACTACACCGGAGACCGAAATCTCCTCCGTAGCCGGATCGACACGATCGCCCCGAGCGAGGGCTCGACCTCGCTCCGCGAGGCGCTCCAGGTTTCCGCCGGCCTGGCCAACCCCTCGAAGCAGATCGACTATGGCGAGGGCGTGGTCGCGACCTCGGTCGTCCCCCCCAAGCTGATGATCTACACCGACGGCGGCTTCTCCGACGTCGAGGGCTTCAGCCTGGGCAACCTCGAGCCCCAGGTCGTCGTGATCGGCCCCGCGCCTCCCCCGGTCACCGACTCGCCCGAAGCCAAGGCCAGGAGCGGCCCGAGCACGAAGAACCCGTCGGACAACCTCGCCATCCTCGCGCTCCAGACCCGGCGAAACGACGACAAGCCCGACCAGTACCAGGTCTTCGGCCGGGTCCATAACTACCGGGCCGAAGCGGTCTCGACCGAGGCCCAGCTCTTCCGGCTCGACCCGAAGAAGCCGGGCAGCCCCGGGACCCTGATCGACGCCATCGCGCTGAAGCTCGCCCCCGGGAGCGACCAGTCGTTCAAGTTCGAGCTCCCCGACACCGGGTTGGCCGAGCTCGAGGTCCGCCTCACCGAGCGCGACTCGCTGCCGCTCGACGACCGCGCCTACGCCGTGGTGGGCAACCCCCGGAAGGCGCAAGTCCTCCTCGTCTCCTCGGGGAATCGCTACCTCGCGGATACGCTGAAGACGCCGACCGCCGCCGAGCGTGCCGACGTCACGGTGGTCACTCCCGCCGAGTTCAAGTCGGACGACGTCACCCGCCAGATCAGCGCCGGGCGCTACGACCTGGTGATCTACGACAACGTCCGACCCTCAGCCCCGCCCGAGGCGAACGCCCTCTATTTCGGCACCCTGCCCCCGGGCGCCGCCTACGAGAAGACGAAGGCCCTCGAGCAGCCGATCATCCTCGACTGGGACGCGAGCCACCCGCTCATGCAGTTCGTGCGCGACCTCCCGACCGTCGCCATCCTCAAGGCGACCGGCGTGGAGCCGCCCCCCGGCTCGACGAACCTGATCGAGAGCGACAAGGGGCCGCTCGCCTTCGTCGCCCCGCGCCAGGGCTTCTCGGACACGGTCGTCACGTTCCCCCTCATGGACGGCGACAAGTTTAACACCAACTGGTATCGAAATATCAGCTTCCCCCTTTTCCTCTTCAACAGCCTCCAGGTCCTCGGCAACGCCCGCGAGTCGTCCGGCGACGAGGTCCACCTCCCCGGCCAGCCCGTCGTCATCCGCGCCGAGGTCTCGAAAGGCGACGTGAAAGTCACCGGCCCCGACGGCAAGGTCGAGGGCCTCACCCGCACGCCGCAGGGGACCTACATCGACAACCACGCCGACGCGACCGGGATCTATCACGCCCGCTGGGAGCCCGAAGGGATGCTCGCCTTCGCCGTCAACCAGTTCGACTCCCGCGAGAGCGACCTGGCCACCCGCGGCCTGGTCCCCGAGGGGATCGACCCCAATTCCTCCCAGGCGGAGGCGTACAAGATCAAGATCGGATACAGCCCCGTCGCGGGGACCGGCAAGACCCGCCCCAGCCGGAAAGACTGGTGGAAGCCGCTGGCGATCCTGGCGCTCGGCGTCGTCCTGCTGGAATGGTATATCTTTAACAAACGGGTCTATATTTAA
PROTEIN sequence
Length: 707
MNFGSLSRTGFPVQFSTPLGGMEWAVLAGIPVGIIALYFLKLRRRPVQVSSTLLWRRSLEDLHVNSLFQRLRKNLLLFLQLLAVLLAMLALAGPKVKGTSTQGQRYVVTIDNSASMSATDVKPSRLARAKDEAKKIVDAMESDDLAMVISFSDRARVVSNYTGDRNLLRSRIDTIAPSEGSTSLREALQVSAGLANPSKQIDYGEGVVATSVVPPKLMIYTDGGFSDVEGFSLGNLEPQVVVIGPAPPPVTDSPEAKARSGPSTKNPSDNLAILALQTRRNDDKPDQYQVFGRVHNYRAEAVSTEAQLFRLDPKKPGSPGTLIDAIALKLAPGSDQSFKFELPDTGLAELEVRLTERDSLPLDDRAYAVVGNPRKAQVLLVSSGNRYLADTLKTPTAAERADVTVVTPAEFKSDDVTRQISAGRYDLVIYDNVRPSAPPEANALYFGTLPPGAAYEKTKALEQPIILDWDASHPLMQFVRDLPTVAILKATGVEPPPGSTNLIESDKGPLAFVAPRQGFSDTVVTFPLMDGDKFNTNWYRNISFPLFLFNSLQVLGNARESSGDEVHLPGQPVVIRAEVSKGDVKVTGPDGKVEGLTRTPQGTYIDNHADATGIYHARWEPEGMLAFAVNQFDSRESDLATRGLVPEGIDPNSSQAEAYKIKIGYSPVAGTGKTRPSRKDWWKPLAILALGVVLLEWYIFNKRVYI*