ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_283737_5

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(5553..6335)

Top 3 Functional Annotations

Value Algorithm Source
short chain dehydrogenase (EC:1.-.-.-) similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 260.0
  • Bit_score: 356
  • Evalue 5.10e-96
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM48 RepID=J2RUJ9_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 253.0
  • Bit_score: 375
  • Evalue 3.80e-101
Uncharacterized protein {ECO:0000313|EMBL:EJM58456.1}; TaxID=1144330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM48.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 253.0
  • Bit_score: 375
  • Evalue 5.30e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas sp. GM48 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGAAAGACGATCGCGAGCTCGAAGGGCTCAGGGCGCTGGTCACGGGCGGGACGAAGGGGATCGGCGAGGCGGTGGCGTCGCGGCTACGCGAGGAAGGGGCGGAAGTCCTCGTCGCGGCCCGGAGGTGGCCGACGCCGATCGGGCCGGATGCGACGTTCGTCGCGGCGGACCTCTCGACGGCCGAAGGGTGTTCGGCGGTCGCCGAGGCGGTCCGGGCGCGGCTTGGCGGGGTCGACATCGTCGTCCACGTGGCCGGCGGTTCTTCGGCCCCCGCGGGCGGCTTTGCGGTGCTCGACGACGCCGAGTGGCGGCGTGCCCTCGAACTCAACCTGCTCGCGGCGGTCCGGCTCGATCGGGCTCTCCTGCCGGAGATGGTCGCCCGAGGCTCGGGTGTGATCATCCATGTCACATCGATCCAGAGACAATTACCCCTTCCCGAAGCGACGATCGCGTATGCCGCGGCGAAGGCGGCGCTCTCGAATTACAGCAAGGGGCTGTCCAAGGAGGTCAGTCCGAGGGGCGTCCGCGTGGTCCGGGTCTCCCCCGGTTGGGTCGAGACGACCGCCGCCACCGGCCTGGTCGAAGAACTGGCGAACCAGATGAAGACCGACGTCGAGGGGGCACGGAAGGCCCTCATGGACTCCCTGGGCGGCATCCCGATCGGCCGCCCGGCCCGGCCGGTCGAGGTCGCGGACCTCGTCGCCTTCCTCGCGTCGCCGCGGGCCGCCTCGATCACCGGCGCGGAGTATGTCATCGACGGCGGGACGGTGCCGATCGCGTGA
PROTEIN sequence
Length: 261
MKDDRELEGLRALVTGGTKGIGEAVASRLREEGAEVLVAARRWPTPIGPDATFVAADLSTAEGCSAVAEAVRARLGGVDIVVHVAGGSSAPAGGFAVLDDAEWRRALELNLLAAVRLDRALLPEMVARGSGVIIHVTSIQRQLPLPEATIAYAAAKAALSNYSKGLSKEVSPRGVRVVRVSPGWVETTAATGLVEELANQMKTDVEGARKALMDSLGGIPIGRPARPVEVADLVAFLASPRAASITGAEYVIDGGTVPIA*