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berkeley_reactor_200306_planktonic_scaffold_302643_21

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 31161..31781

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Leptonema illini DSM 21528 RepID=H2CDB8_9LEPT similarity UNIREF
DB: UNIREF100
  • Identity: 40.0
  • Coverage: 90.0
  • Bit_score: 66
  • Evalue 2.30e-08
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 31.3
  • Coverage: 115.0
  • Bit_score: 62
  • Evalue 9.30e-08
Tax=RIFOXYA2_FULL_RIF01_40_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 27.3
  • Coverage: 154.0
  • Bit_score: 67
  • Evalue 2.40e-08

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Taxonomy

RIFOXYA2_FULL_RIF01_40_8_curated → RIF1 → Bacteria

Sequences

DNA sequence
Length: 621
ATGAGCACGAAGAGACCGGTGACGAAAAAGACTAAGTCCATGATACTGACGGGCAACGTCTATGCCGACGTCACGGACTTGGTCCGGGACACCCTGGACGAGGGTTTTGCCGAGGAATTCGAGACCTACGTCGCCGACCGTCGCCTCGTCAAAAGCCTGACGATCCTTCGATGCCTCAAAGAAGTCAGTCAGGCCGACCTGGCCGCCAAGATGGGCTGTGGTCAACCGAAGCTCTCGAAGATCGAGAACTCGGCCGATGCCGACCTCGATTTCGGCGACCTCGTCGACTACCTCAAGGCCCTGGACATGGCCATCCAGATCACACTCACGCCGCTCCAAACGAGCCGGGCGGACCGAATCCGACTCCTCACCGCCCAGCTCAAGCGGGAACTCGACCCGGGACGAGACAACCAGACGGCCAGCGGAGGAGTCGAGGCCCTTGCGATCGGTACGATGCAGAAGATGGTCGAGTTGATCGAAACGACGATCGACCGCCTGCCGCATGATCGCGAGGCCACCGAGCCCGTCACAGTCGTCGTCCAAGACGAACGGGGTGAGCACCTCGCGCTCGGCGATCCGAAACGATTCCGCAAAGCGGCCAATCTCGAAACTCAGGGATGA
PROTEIN sequence
Length: 207
MSTKRPVTKKTKSMILTGNVYADVTDLVRDTLDEGFAEEFETYVADRRLVKSLTILRCLKEVSQADLAAKMGCGQPKLSKIENSADADLDFGDLVDYLKALDMAIQITLTPLQTSRADRIRLLTAQLKRELDPGRDNQTASGGVEALAIGTMQKMVELIETTIDRLPHDREATEPVTVVVQDERGEHLALGDPKRFRKAANLETQG*