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berkeley_reactor_200306_planktonic_scaffold_344106_7

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(4227..5207)

Top 3 Functional Annotations

Value Algorithm Source
Squalene synthase HpnC n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJF0_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 296.0
  • Bit_score: 471
  • Evalue 6.30e-130
squalene synthase similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 296.0
  • Bit_score: 471
  • Evalue 1.80e-130
Squalene synthase HpnC {ECO:0000313|EMBL:AGA29372.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 296.0
  • Bit_score: 471
  • Evalue 8.90e-130

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 981
ATGTCGTTCACGGACGAGCTCCGCAGGTTCGGCCCCGATGCGTCGTACGCGATGACCCTCGCCGGGGCCCGCGACTATTGCGCCCGCCTGACGGCCTCGCATTACGAGAACTTCAGCGTCGTCACCTGGCTCACCCCTCGCCCGCTCCGGCCGGCGTTTCAGAGCATCTATGCCTTCTGCCGGTGGTCCGACGACCTCGGGGACGAGGTCGGCGACCCGGAGCGCTCGCGAGAGCTGCTCGCCTGGTGGCGCGGGGAGCTCCGCTCGATGTACGCGGGGGAGGCGCGACACCCGGTGATGCTCGCCCTCCGCGAGACGGTCGAGGCGTTCGCGATCCCGATCGATCCGTTCGAAGCCTTGATTTCGGCCTTCGAGCAGGACCAGTCGGTGACCGAGTATGCCACGTATGAGCAGTTGCTCGACTACTGCACCCGCTCGGCCAATCCCGTCGGACACCTCGTGCTCTACCTCGCCCGGTCCTTCGACGCCGACAACGCCGCGCTCTCGGACATGACCTGCACGGGCCTCCAGCTCGCGAACTTCTGGCAAGACGTGGCGCGAGACCTGGCGATCGGCCGGGTTTACTTGCCCCGCGAAGATCGAGGACGCTTCGGGTATCCCGACGCCGACCTCCGCGCCTTGCGATTCACCCCGGCCTTCGCGTCCTTGCTCGAGTTCGAGGCCGATCGTGCCCGAGCCCTCCTCGAAGCGGGTCGGGCGCTCATCCCCCGGATGCCCCGGGCCCTCGCCGTGGACGTGGACCTCTTCTCCCGAGGGGGCCTGGCGATCCTCGACCGGATCGAGGCGTGCGGCTTCGACGTGCTCCGCGGCCGACCCCGGCTGGGCAAGCTCGCGAAGTTCGGGCTCCTCGCCCGGGCCATGGTCGGGCTCGTGCTGGCCCGACGGCCGGGAGCCCCGGCGGTCATCCCCCCGACCGTCCTCGCGAATCATGTCGCCGAGGGCCAAGCCCGACGTCGATAG
PROTEIN sequence
Length: 327
MSFTDELRRFGPDASYAMTLAGARDYCARLTASHYENFSVVTWLTPRPLRPAFQSIYAFCRWSDDLGDEVGDPERSRELLAWWRGELRSMYAGEARHPVMLALRETVEAFAIPIDPFEALISAFEQDQSVTEYATYEQLLDYCTRSANPVGHLVLYLARSFDADNAALSDMTCTGLQLANFWQDVARDLAIGRVYLPREDRGRFGYPDADLRALRFTPAFASLLEFEADRARALLEAGRALIPRMPRALAVDVDLFSRGGLAILDRIEACGFDVLRGRPRLGKLAKFGLLARAMVGLVLARRPGAPAVIPPTVLANHVAEGQARRR*