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berkeley_reactor_200306_planktonic_scaffold_346475_39

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 57090..57680

Top 3 Functional Annotations

Value Algorithm Source
Hydrogenase expression/formation protein hupD n=1 Tax=Medicago truncatula RepID=G7ZV73_MEDTR similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 166.0
  • Bit_score: 187
  • Evalue 1.10e-44
Hydrogenase expression/formation protein hupD {ECO:0000313|EMBL:AES83111.1}; TaxID=3880 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago.;" source="Medicago truncatula (Barrel medic) (Medicago tribuloides).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 166.0
  • Bit_score: 187
  • Evalue 1.50e-44
hydrogenase maturation protease similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 175.0
  • Bit_score: 179
  • Evalue 5.00e-43

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Taxonomy

Medicago truncatula → Medicago → Fabales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 591
ATGAGCTCCCCGCGCATCCTGGTCGCCGGGATCGGGAACATCTTCCTCGGCGACGACGCGTTCGGCTCCGAGGTCGCCCGGAGGCTCACGGGTCATCCCTTGGCCCATGGCGTCACCGTGGTCGACTTCGGCATCCGAGGGATCGACCTCACCTACGCGCTCCTCGACGGCTACGACGCGGCGATCCTCGTCGACGCCACGACGCGAGGCGGCCCCCCCGGCACGCTCTACGTGATCGAGCCCGAACCCATCGAGGTCGACTCAACCTCGAGTGAGGCCCCGCTCTTCGAAGCCCACAGCCTCGACCCTGCCAAGGTGCTCCGCCTGGCCTCGGCGCTCGGTCCGGCCACGAAACGAGTCCTCCTCGTCGGCTGCGAGCCCGAGACGTTCGGCACCGACGACGACCCCGTCATGGGCCTCAGCCCGGCCGTGGATGCCGCCGTCGACGAGGCGATTCGGATGATCGACTCGCTCGCGGCGAAGCTGCTCGCCGAATGTCCTTCGTCATCTCGTCATCCTGAGCGACCTTTCGATCCTCAAGACGACCTGGAAGGAGGTGTGCCATGCTCGAGAGAATCGCCGGTTTCCTGA
PROTEIN sequence
Length: 197
MSSPRILVAGIGNIFLGDDAFGSEVARRLTGHPLAHGVTVVDFGIRGIDLTYALLDGYDAAILVDATTRGGPPGTLYVIEPEPIEVDSTSSEAPLFEAHSLDPAKVLRLASALGPATKRVLLVGCEPETFGTDDDPVMGLSPAVDAAVDEAIRMIDSLAAKLLAECPSSSRHPERPFDPQDDLEGGVPCSRESPVS*