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berkeley_reactor_200306_planktonic_scaffold_346475_48

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 65818..67089

Top 3 Functional Annotations

Value Algorithm Source
Putative sigma factor, ECF subfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1III6_KORVE similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 416.0
  • Bit_score: 417
  • Evalue 8.30e-114
RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 416.0
  • Bit_score: 417
  • Evalue 2.30e-114
Putative sigma factor, ECF subfamily {ECO:0000313|EMBL:ABF43314.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 416.0
  • Bit_score: 417
  • Evalue 1.20e-113

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Taxonomy

Candidatus Koribacter versatilis → Candidatus Koribacter → Acidobacteriales → Acidobacteriia → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1272
ATGGTCCGAGAGCCTCGGGTCGACGAGCTGGTCGAGCATCTGTTCCGCCACCAGGCGGGGCGGATGCTCGCCGTCCTGACGCACATTTTCGGGTTCGAGAACCTGGAATTGGCCGAGGAGGTCGTCCAGGACGCCTTGCTCCAGGCCCTGCGGCAGTGGCCGTTCTGCGGGATCCCGGAGGATCCCCGGGGCTGGCTCCTCCGCGTGGCCCGCAACAAGGCGCTCGACGTCCTGCGCCGGAAGGCGTCGCTGAGGAGGAAGGAGCGGGCGCTCGAGGAGCGATTTCAGGCGCTCCAGGCCTGCTCCGAGGACGTCGACGTCCCGGACGACGGCGACCTCGGCGACGAACAGCTCGCGATGATCTTCGCCTGCTGCAGCCCGGACCTGACGCCGGAAGCCCGCGTCGCCTTGACGCTCAAGGCCGTGAGCGGCTTCAGCGTGGCCGAGATCGCCCGGGCCTTCCTCGCCGAAGAAACGACGATCGCCCAGCGCCTCGTCCGGGCCAAGCGACGGATCCGCGACCTCGGCATCACCCTGGCCCTGCCTCCCCCGCCGGAGCTCCCCGGGCGGCTCGACTCGGTGCTCCAGGTCCTCTACCTGCTCTTCAACGAGGGCTACGGGGCCCATGCCGGCGAGGACCTCGTGCGCGAGGACCTCTGCGGCGAGGCGATGCGGCTGGCCCAACTCCTGGCCAATCGCCCCTCGACGGCGCTCCCGAAGGTCCACGCCCTGCTCGCGCTCTTCTTCTTCCAGGCCGCCCGCTTCTCGACCCGAGTTGACGGCGACGGCAACCTCCTCCTGCTGGAAGAGCAGGACCGGAGCGAGTGGGACCAGAACCTTCTGGCTCAGGGCCTCATGCAGCTCCAGCACTCCTCGCAGGGCGACGAGATCAGCGACTATCATCTCCAGGCCGGCATCGCCGCGGTCCACGCGACGAGCCCTTCGTTCGCGGAGACGGATTGGCCCTACCTCCTCGACTTGTATGACCATCTGTTGAGGACGTCTCCCTCGCCGGTCGTGACCCTGAACCGGGCCATCGCCCTGTCCGTGGTCGAAGGCGCCGAGGCCGCGCTCCGTTCCCTGGAGCCACTCGTCGGCGATCCTTCCATGAAGAACTACTACCTCTTCCCCGCCGTCCGCGCCGACCTCTTCCGACGCCTTGGCCGCAACGACCTCGCCGCCTCCTGCTACCTCGAGGCCCTCAGGTGCCCGTGCACCGAGCCCGAACGTCGCTTCCTCTCGAAGCGGCTCGAAGAAAGGCTTCACGCCTGA
PROTEIN sequence
Length: 424
MVREPRVDELVEHLFRHQAGRMLAVLTHIFGFENLELAEEVVQDALLQALRQWPFCGIPEDPRGWLLRVARNKALDVLRRKASLRRKERALEERFQALQACSEDVDVPDDGDLGDEQLAMIFACCSPDLTPEARVALTLKAVSGFSVAEIARAFLAEETTIAQRLVRAKRRIRDLGITLALPPPPELPGRLDSVLQVLYLLFNEGYGAHAGEDLVREDLCGEAMRLAQLLANRPSTALPKVHALLALFFFQAARFSTRVDGDGNLLLLEEQDRSEWDQNLLAQGLMQLQHSSQGDEISDYHLQAGIAAVHATSPSFAETDWPYLLDLYDHLLRTSPSPVVTLNRAIALSVVEGAEAALRSLEPLVGDPSMKNYYLFPAVRADLFRRLGRNDLAASCYLEALRCPCTEPERRFLSKRLEERLHA*