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berkeley_reactor_200306_planktonic_scaffold_58787_3

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 1067..1498

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U1ZVI4_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 44.5
  • Coverage: 128.0
  • Bit_score: 106
  • Evalue 1.80e-20
Transcriptional regulator {ECO:0000313|EMBL:ERI51113.1}; TaxID=1386078 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. EGD-AK9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.5
  • Coverage: 128.0
  • Bit_score: 106
  • Evalue 2.50e-20
OmpR; response regulator similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 139.0
  • Bit_score: 103
  • Evalue 4.30e-20

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Taxonomy

Pseudomonas sp. EGD-AK9 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 432
ATGGCAAACAAACCCCAAATTCTAGTGGTTGAAGACGAACATGCAGTGGCCGGATTGATGGTATTCGCGTTAAGCCGCGCCGGATGTGCCGCACAGACGGTGGCCAATGCCACCCAAGCGTTGCAACTGGCTCAAAAAGAAAAGTTCGACCTCATTACGCTGGACGTGAACATGCCAGGCATGAGTGGCTTTGAATTATGTCGTCGGCTGAAACAGATCGGCAGGCTGCGTGAAACACCGATTATTTTCGTCTCCGGCCAGAGCAACGAGGATCACATTCGACATGGATACGAAGCGGGTGCCGCCGATTACATAACGAAGCCATTCCTTCCGACAGAGTTCGTCTCTCGAATTTTGTCACACATCCGATCAGTGCCTAAATCAGCAGCATGTCCGGGTAAAGGCATGGACGCGGAACCTCAAAATATTTGA
PROTEIN sequence
Length: 144
MANKPQILVVEDEHAVAGLMVFALSRAGCAAQTVANATQALQLAQKEKFDLITLDVNMPGMSGFELCRRLKQIGRLRETPIIFVSGQSNEDHIRHGYEAGAADYITKPFLPTEFVSRILSHIRSVPKSAACPGKGMDAEPQNI*