ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_58787_30

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 40583..42226

Top 3 Functional Annotations

Value Algorithm Source
Adenine specific DNA methylase Mod n=1 Tax=Methylomicrobium album BG8 RepID=H8GQQ5_METAL similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 561.0
  • Bit_score: 758
  • Evalue 2.60e-216
DNA methylase N-4 {ECO:0000313|EMBL:KFN37738.1}; TaxID=1538640 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. F21.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 544.0
  • Bit_score: 789
  • Evalue 1.90e-225
DNA methylase N-4/N-6 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 543.0
  • Bit_score: 740
  • Evalue 3.50e-211

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Smithella sp. F21 → Smithella → Syntrophobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1644
ATGAGTTCAAAAAAACAAAAATTGGAACTGACGTGGATTGGCAAGGAGAACCGGCCACGGCTGGAACCGCGCATCCTGCTGGAAGACCCGGAGAAATCTTATCACGCCAGGCAGCGCGTGACGGATAATGACCAGTTCGATAACCGGCTCATCTTTGGCGACAATTTGCTCGCCCTCAAAGCGCTGGAACAGGAATTCGCCGGCAAAATAAAGTGCATCTGCATTGACCCGCCTTACAACACTGGAAGCGCGTTTGATCATTACGACGACGGAGTAGAGCATTCACTTTGGCTGTCTTTGATGCGTGACCGTTTGGCTGTCATGCACAAGCTGTTAACTACGTCTGGAAGTCTATGGGTTTCTCTGGATGATAACGAAGCTCACTACTTTAGAGTAATGGCAGACGAAGTATTCGGTCGTCGAAACTTCATTGCGGATGTTGCGTGGCAGAAAAAGTATTCGCCTGGCAACAACCAAAAAGGACTTTCGTCGGACAACGATCATATTCTTGTTTGGGCAAAAGATGCGGAACAATGGGCATGGAATCTACTTCCCAGAACCGTTAAGCAGGATGCAGCATATAAAAATCCGGATAACGATCCGCGCGGCCTTTGGAAGCCAAGTGATCTCACACGAGCTGAACATCGTGATCGTGATTTTTACCCAATTAAAACTCCATCAGGAAAGGAAGTTTTACCTGCGTCAGGCCGAAGCTGGAGCCGTCCGCCCGATGAAATTGAACGGCTCCGCGCAGATAAGAGACTTTGGTTTGGACCAAAAGGAGACGCGAAACCAAGTTTGAAACGTTTTTTGACAGAGGTGCAAGATGGTGTTGTTGCGCGCACGATATGGTTGCGCGATGAAGTCGGAGACAACGAAGAAGCAAAGAAGGAAGCTAAAGTTTTGAATGAAAAAGATATATTTGGAACACCAAAACCAGAAAGGCTAATTCAGCGAATTGTTCAGATTTCCACCAAGCCAGGCGATTGGGTGCTCGACTCATTTTCCGGCTCCGGCACAACCGGCGCAGCCGCCCACAAAATGGGCCGCCGTTGGATCATGGTTGAACTCGGCGAACATTGCCACACGCACATCATTCCGCGTCTTCAGAAAGTGATTGATGGTTCAGACATCGGCGGCATCACGGAAGCCGTCGGTTGGAAAGGCGGCGGCGGTTTCCGCTATTACCGGCTCGCACCGTCGCTGCTGGAAAAGGACAAGTGGGGCAACTGGGTCATCAGTAAGGAATTCAACGCCGCCATGCTCGCCGAGGCCGCGTGCAAGCTGGAAGGTTTTCAATATGCGCCCAGCGATATGGTGTATTGGCAGCACGGCCATTCCACCGAGCGGGATTTCATTTACGTGACCACCCAGCAGTTGAGCGCCGACCAGCTCGCGCAGTTGAGCGACGAAGTCGGCCCCGAACGGACGTTGCTCGTCCTCTGCGCCGCCTTCCGCGCCGGGACTAAAAACGTGACGGAACGTTTCCCGAATTTGACGGTGAAAAAAATCCCGAAACAGGTTTTGTCGCGCTGCGAATGGGGCCATGACGATTACAGCCTGAACGTCGAGAATTTGCCCAAAGCCCCGGCTCCATCTTCCAAGACGGACAGACGTGGCCAGCAGGAAATGGAACTGGTTTGA
PROTEIN sequence
Length: 548
MSSKKQKLELTWIGKENRPRLEPRILLEDPEKSYHARQRVTDNDQFDNRLIFGDNLLALKALEQEFAGKIKCICIDPPYNTGSAFDHYDDGVEHSLWLSLMRDRLAVMHKLLTTSGSLWVSLDDNEAHYFRVMADEVFGRRNFIADVAWQKKYSPGNNQKGLSSDNDHILVWAKDAEQWAWNLLPRTVKQDAAYKNPDNDPRGLWKPSDLTRAEHRDRDFYPIKTPSGKEVLPASGRSWSRPPDEIERLRADKRLWFGPKGDAKPSLKRFLTEVQDGVVARTIWLRDEVGDNEEAKKEAKVLNEKDIFGTPKPERLIQRIVQISTKPGDWVLDSFSGSGTTGAAAHKMGRRWIMVELGEHCHTHIIPRLQKVIDGSDIGGITEAVGWKGGGGFRYYRLAPSLLEKDKWGNWVISKEFNAAMLAEAACKLEGFQYAPSDMVYWQHGHSTERDFIYVTTQQLSADQLAQLSDEVGPERTLLVLCAAFRAGTKNVTERFPNLTVKKIPKQVLSRCEWGHDDYSLNVENLPKAPAPSSKTDRRGQQEMELV*