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berkeley_reactor_200306_planktonic_scaffold_58787_79

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 101777..103120

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.4
  • Coverage: 364.0
  • Bit_score: 194
  • Evalue 2.20e-46
DNA polymerase IV n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z9H3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 35.4
  • Coverage: 364.0
  • Bit_score: 194
  • Evalue 1.60e-46
yqjH; DNA polymerase IV similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 325.0
  • Bit_score: 186
  • Evalue 1.60e-44

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Taxonomy

Nitrospina gracilis → Nitrospina → Nitrospinales → Nitrospinia → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 1344
ATGAACCGGATTCTGCACGTGGATGGCGACAGCTTTTTCGCGAGCTGCGAAATCGCGCTCGACGACAAGCTGCAAGGGCGGCCCGTGTGGGTCGGCGGCGGCCGGCGCGGCGATGGCATCGTCATCGCGGCCAATCGCGCGGCCAAAAAATTCGGCGTCACGACGGGCATGGCGTGTTTTGAAGCCCGGCGCCGTTGTCCCGCCGGCGTGTTGTGTCGTCCGCATTACGACGCCTACCGCGACATCTCGGCCCGGATGTTTCACGTGCTGGAGCAATACGCGCCGACGCTCGTGCCGATTTCGATTGACGAGGGTTTTCTGGATTTGACCACGATGGACCAGGTGGTCTGGCGCCATACGACTTCCGAGAAATATGTGCGGGAAATTTGCGAACACATTTCGCGCGAGGTGAAAATTCCCGTCTCCGCCGGCCTGGGCAATTCCTCCCGCCTGGCCAAGCTGGCCACGGACGCCGCCAAGCCGGGTTTTCTCGAAGTCAAGCCGGGCGAGGAAAAGGAGTTTCTCAAGGACCGTCCCGTGCGGGAACTTTCCGGCATCGGCAAAAACCGGCAGCGTTCGCTCGCCGCGCTCGGGGCGTTGACCTTCGGCGACGTGGCGAAAATGCCCTCGATGTTGCTGCAACAAAAATTCGGCATCTGGGGCCAGCAATTGTGGCTGTTTGCGAATGGCAAATGGAACGAGCCGCTGCTGCTCGCAGTGAAAGATCGCACGACGATTTCCAGCAACACGACGCTGCCTTACGACGAACCCGATTACGAGGCGGCGCTGACGTTTGCGTTGAGCGAAACCACGCGGCTGGTCGGCCAGTTGCGGCGCGAGCAATTGCAGGCGCGCGAGATGAGTTTGACGATTCGCTTTGACGATTTTGCCGAGGTGGGCGGCAGTTACCGCTTTCAGCATCCGCAGTTTTTGAACTCCGTCATCAACGCGAACTTGGAGGACATTTTCCGCAGCATCATGCAAGGACAACGGAAATCCGTGCGGCAGATTCGCATCGCCTTCTGGAATCTCGCGCGGCTCGACACGCAGCCGACCCTGTGGGGCCGCACGCCCGCGGAACGCTGGGGCGCGCTGGATGACGCGACGCATGAATTGAACACGCAATTTTCGCGCCCGGAAAAACCGGCGTTAATGACCGGCGCGCAACTGGCGCTGCGCCAGCTCGACGAGGCGCACAAAAATCCCAAGGCGAAATGTCCCTTCTCGCCACAACGGGAAATCGTGAAAAAACTCTGGGGAACTGATGCTGATCCGCTGGCCCACAAGGGCGACTGGCAAAAGCGCCTGGCGAAGGTCAGCAAACAGGCGCAGTTTCGGCACTGA
PROTEIN sequence
Length: 448
MNRILHVDGDSFFASCEIALDDKLQGRPVWVGGGRRGDGIVIAANRAAKKFGVTTGMACFEARRRCPAGVLCRPHYDAYRDISARMFHVLEQYAPTLVPISIDEGFLDLTTMDQVVWRHTTSEKYVREICEHISREVKIPVSAGLGNSSRLAKLATDAAKPGFLEVKPGEEKEFLKDRPVRELSGIGKNRQRSLAALGALTFGDVAKMPSMLLQQKFGIWGQQLWLFANGKWNEPLLLAVKDRTTISSNTTLPYDEPDYEAALTFALSETTRLVGQLRREQLQAREMSLTIRFDDFAEVGGSYRFQHPQFLNSVINANLEDIFRSIMQGQRKSVRQIRIAFWNLARLDTQPTLWGRTPAERWGALDDATHELNTQFSRPEKPALMTGAQLALRQLDEAHKNPKAKCPFSPQREIVKKLWGTDADPLAHKGDWQKRLAKVSKQAQFRH*