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berkeley_reactor_200306_planktonic_scaffold_58787_88

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(109741..110838)

Top 3 Functional Annotations

Value Algorithm Source
Oxidoreductase domain protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ECU9_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 48.9
  • Coverage: 368.0
  • Bit_score: 370
  • Evalue 1.70e-99
oxidoreductase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 368.0
  • Bit_score: 370
  • Evalue 4.80e-100
Oxidoreductase domain protein {ECO:0000313|EMBL:AEI48157.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.9
  • Coverage: 368.0
  • Bit_score: 370
  • Evalue 2.40e-99

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Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1098
ATGAAACGAATTTTTCCAGTTCTGTTTGCGCTGCTGGCTTTGACCGCCTTCAACGCGCCTGCCCAAACGGGAAAACCGCCCGTGCGGATCGCCCTGGTCGGCCTGTCGCACGATCACGCGTGGGGATTCATCCCGCGTTTTGCGGACCGAACCGATGTGCAACTCGTCGGCATCGTGGAAACCAATCCGGATTTGATCACGCGTTATGCCAGCCGGTTTCACCTGCGCCGCGATTTGTTTTATCCCAGCCTCGGGGCACTCTTCGCAAAAACCAATGTCCAGGCGGTGGCGGTGTTTACCTCCATCTTCGATCACGAGCGCGTGGTCGAAGCCTGTGCGGCGCACGGCGTGAATGTGATGATGGAAAAGCCGCTGGCCACCAACCTGCAGCAGGCGCGCGCCATCCAGGCCGCCGCCGAAAAAAGCGGCATCCAGGTCATGGTCAATTATGAAACCAGCTGGTATCCGGCCACCCGCGCCGCGTATGCGCTGGTGCATGAGCGGCATCAACTCGGCCGGATTCGCAAAATGGTCTTTCACGACGGCCACAACGGCCCGCAGGAAATCGGTTGTTCAACCAATTTTCTCGCGTGGCTGACGGATCCGGTTTTGGACGGCGGCGGTGCGATCAACGATTTCGGGTGTTACGGCGCGGACATGGCAACGTGGTTCATGGACGGACAGAAGCCGGTTTCCGTTTTCGCGGTCGCACAGCATCTCAAACCGCAGATTTATCCCCGGGTGGAGGATGATGCGACCATTGTGCTGACGTATCCCGCGGCACAAGTGATTTTGCAGCCGTCCTGGGACTGGCTGTTCGACCGCAAGGACATGGAAGTGTATGGCGAAAAGGGCTGCGTGTTTGTGCCGCATCCGAACGTGATGCGGGTCCGCACAACAACGATGCCCAAGGAAACGGAAACGACCCTGCCCGACCTGGCCGGCGTCCAGGGCGATCCGCTATCCTATCTCGCCGCCGTCACCCGGGGCGAAATTAAGCCGGCCGGTCTGGCGTCGCTCGGAGTGAACATGATGGTCGTGGAGATTCTCGACGCCGCCCACGAATCGGCCAACACGGGAAAATTGATCAAGCTTTGA
PROTEIN sequence
Length: 366
MKRIFPVLFALLALTAFNAPAQTGKPPVRIALVGLSHDHAWGFIPRFADRTDVQLVGIVETNPDLITRYASRFHLRRDLFYPSLGALFAKTNVQAVAVFTSIFDHERVVEACAAHGVNVMMEKPLATNLQQARAIQAAAEKSGIQVMVNYETSWYPATRAAYALVHERHQLGRIRKMVFHDGHNGPQEIGCSTNFLAWLTDPVLDGGGAINDFGCYGADMATWFMDGQKPVSVFAVAQHLKPQIYPRVEDDATIVLTYPAAQVILQPSWDWLFDRKDMEVYGEKGCVFVPHPNVMRVRTTTMPKETETTLPDLAGVQGDPLSYLAAVTRGEIKPAGLASLGVNMMVVEILDAAHESANTGKLIKL*