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berkeley_reactor_200306_planktonic_scaffold_80596_2

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 409..1461

Top 3 Functional Annotations

Value Algorithm Source
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 349.0
  • Bit_score: 569
  • Evalue 2.60e-159
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFD9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 349.0
  • Bit_score: 569
  • Evalue 1.80e-159
tRNA-specific 2-thiouridylase mnmA similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 350.0
  • Bit_score: 354
  • Evalue 3.40e-95

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1053
ATGAGCGGCGGAGTGGATTCCTCCGCCACGGCGGCCTTGCTCCTGGAGCAGGGTTACGATGTCATTGGCATCACGCTTAAGCTCTGGCCGCAGGATTGCGTGAATCGCGCGGAGGACAAGTGTTGCGGGCCGCAGGCGGTGACGGATGCGCGTTCGGTGTGTCACAAGCTGGACATTCCGTATTACCTCATTGATGAATCGGCGGATTTCCAGAAATACGTCATCCAATATTTCGCGGAGGAATACAAGGCCGGTCGCACGCCGAATCCGTGCGTGATGTGCAATCAGAACCTCAAGTTCGGCCGGTTGATTGACCGGGCGGATCAGTTGGGCGCGGAGTTCATCGCGACGGGACATTTTGCGCGGATTGAAAAAAGTGCCGATGGCTCACGCCATTTGCTCAAGCGCGGGCGGGATTTGCGCAAGGATCAAAGTTATTTCCTCTTTTCCCTGCGCCAGGATCAGCTCGCGCGCACCATTTTTCCGCTGGGCGAAAAGACCAAGAGCGACACGCGCGATGTGGCTCGCCACTGCAATCTCAAGACGGCCGACAAGGAGGAGAGCATGGAAATCTGCTTTGTGCCGGACAACGATTACGGCGGGTTTCTCCGGACGGCGAATCTCGTGCAAAAGCATCGCGGCGACATCACGGATGTTTACGGCAACAAGCTGGGCCATCACGATGGTATCGAATTTTACACCATCGGCCAGCGGCGCGGTTTGGGCATCACCACGCCCAAACCGGTTTATGTTGTTGAATTGGACGTGGAAAATAATCGCGTTGTGGTCGGCGACGAATCCGCTTTGGAACGTGACGAGTGCATCGCGGAACGCTGCAATTTTCATCCGTTCGACCAGTTGACTGGGCCGTTGGAGGTCACGGCCAAAATTCGCTACAATCATCCCGGCGCGCCGGCGACGATTACGCCCTTGGGCGATAATCGGGTGAAGGTGAAATTGCACACGCCCGCCCGCGCCATCACGCCCGGCCAGGCGGCGGTGTTTTATCAGGATGATTTGGTGGTTGGCGGCGGCTGGATTACGCGGGGGTAG
PROTEIN sequence
Length: 351
MSGGVDSSATAALLLEQGYDVIGITLKLWPQDCVNRAEDKCCGPQAVTDARSVCHKLDIPYYLIDESADFQKYVIQYFAEEYKAGRTPNPCVMCNQNLKFGRLIDRADQLGAEFIATGHFARIEKSADGSRHLLKRGRDLRKDQSYFLFSLRQDQLARTIFPLGEKTKSDTRDVARHCNLKTADKEESMEICFVPDNDYGGFLRTANLVQKHRGDITDVYGNKLGHHDGIEFYTIGQRRGLGITTPKPVYVVELDVENNRVVVGDESALERDECIAERCNFHPFDQLTGPLEVTAKIRYNHPGAPATITPLGDNRVKVKLHTPARAITPGQAAVFYQDDLVVGGGWITRG*