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berkeley_reactor_200306_planktonic_scaffold_80596_25

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 19987..20907

Top 3 Functional Annotations

Value Algorithm Source
Rhomboid family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF12_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 41.8
  • Coverage: 323.0
  • Bit_score: 216
  • Evalue 2.60e-53
Rhomboid family protein {ECO:0000313|EMBL:EEF61510.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.8
  • Coverage: 323.0
  • Bit_score: 216
  • Evalue 3.70e-53
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 34.9
  • Coverage: 255.0
  • Bit_score: 137
  • Evalue 5.80e-30

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 921
ATGCGCCGGCGGGATTACCATTCCGCCAGTTGGAGTCCGTCAACCAGTTCGCGCTGGTCGTGGACGGTGATTTTGCTGGTGACGTATGCGGTCGTTTTCCTGCTGGAACTGGCGTCCCGCCAATTTTTCCCGCACAACCTGCTGTTTCAGGGGCGGGAAATTTTCACCCCGTCCGGGCCGGAATTTTTACCGGGCTACCTGCCGTTGAGCCTGGAGGGAATCAAGCACGGATACCTCTGGCAATTATTCACGTATCAGTTCATGCACGAAGGCTGGATGCACATTCTGCTGAACAGTTGGGTGATTTACATGTTTGGCCGGGAAATGGAAGCGGTGCTGGGCGGCAAAAAATTTCTGGCGCTGATGCTTTCCAGCGGAGCGGTGGGCGGCATTTTTCAAGTCATCGTGGCCGCCATCTGGCCGCAATACTTTGGCGGCTCGGTGGTGGGCGCATCCGCCTGCGGTTTTGGCTTGATTGCCGCGTATGCCACGATGTTTCCGGATCGTGAACTGACGATGCTGCTGCTCTTTTTCATTCCCGTTCACATGCGCGCCCGAACGCTGTTGATCGCCTGTGTGGCCATTGCCGTGGCGGGCTTTGCGTTCCACGATGTATTCATGCCGCACGTCGCCCACCTGGCGCACCTTGGCGGCATGGCGATGGGCTGGTTTTTTGTTCGCAGAATTCTGCAAGGCGACTGGCCGGCCTGGTCGCGAGTCCTTCGGCCGGCGGAGAAAACCGTCCGCCGGCCGGTTCCACGCGTCCGGGCGGAGCCGGCTGAGACCAAAACGGAAGAAGGGTTCATGGAAAGCGAGGTGGACCCGATTCTGGACAAGATTTCCGCCCACGGCATCCAAAGCCTGACGGCTCGCGAACGGCAGATTCTCGAAGCCGCCCGCAAGCACGTGGGACGGTCTTGA
PROTEIN sequence
Length: 307
MRRRDYHSASWSPSTSSRWSWTVILLVTYAVVFLLELASRQFFPHNLLFQGREIFTPSGPEFLPGYLPLSLEGIKHGYLWQLFTYQFMHEGWMHILLNSWVIYMFGREMEAVLGGKKFLALMLSSGAVGGIFQVIVAAIWPQYFGGSVVGASACGFGLIAAYATMFPDRELTMLLLFFIPVHMRARTLLIACVAIAVAGFAFHDVFMPHVAHLAHLGGMAMGWFFVRRILQGDWPAWSRVLRPAEKTVRRPVPRVRAEPAETKTEEGFMESEVDPILDKISAHGIQSLTARERQILEAARKHVGRS*