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berkeley_reactor_200306_planktonic_scaffold_80596_83

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(114226..115035)

Top 3 Functional Annotations

Value Algorithm Source
Flagella basal body P-ring formation protein FlgA n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E4S2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 27.5
  • Coverage: 262.0
  • Bit_score: 81
  • Evalue 1.20e-12
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 33.1
  • Coverage: 133.0
  • Bit_score: 76
  • Evalue 8.10e-12
Tax=CG_Verruco_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 25.3
  • Coverage: 241.0
  • Bit_score: 94
  • Evalue 2.40e-16

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Taxonomy

CG_Verruco_01 → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 810
ATGAAATCTTCGCGCCAAACCAATTTTCCCGGGCTGCGCCGGACGCTTTTCGCGATGGCCTGCTGGTCGGTCGCGGGCGCCTTCGCACTTTCATCGCGGAGCGAAACGGCCGCCAACGCCAGCGCGGTCGAAACCCCTTCCGCCAGCGCGCCCGCCGCCCCGCCGGCCACGCATGTGCTGACCGAAAATGACGTAGTGGATCTGATCACGCAAAAGCTGCAAAACGATTTTGTCCAGGACGAAGGCAAGCTGGAGCTTCAACTGACGCAGCCGTGGAACGCGCCGACGGTGCCGGACGAACCCCTGACCCTGAAAGTGTTGGAGCTGCCCAGCGTGGGCGTCACACCGACCTTCATCATCCGTTTCCAGCTTTATGATCAGGATAAAAGCCTGGGCATCTGGCAAACCTCCGTGCGCGCCCACGTCTGGCGGGATATCTGGGTGGCCAATTCCGATTTGCAGCGCGGCACGCTGGTGGCGGATGCCGACGTGAAAAGCGAGCGCCGCGACGTGTTGCTGCTACACCAGTCGCTGGCGGAAATTTCGCGTCAGGACACCTCGTCCGAACTGGCGCAACCGGTCCCGGCCGGCACGGTTTTGCTGGACCGGATGATCCGCCCGCGCACGTTGATCCATCGCGGCCAGATCACCAACGCGCTGGTGGAATCCGGCGGATTGAGCGTCACCACCAAGGTGGAGGCGCTGCAGGACGGCGCCGCCGGCCAGATCATTCACATCCGCAATGTGTCGTCCCGCCGGGATCTCACCGGCAAAGTCGTGAGCGACCGGACCATTTTGATCAACCTGTAA
PROTEIN sequence
Length: 270
MKSSRQTNFPGLRRTLFAMACWSVAGAFALSSRSETAANASAVETPSASAPAAPPATHVLTENDVVDLITQKLQNDFVQDEGKLELQLTQPWNAPTVPDEPLTLKVLELPSVGVTPTFIIRFQLYDQDKSLGIWQTSVRAHVWRDIWVANSDLQRGTLVADADVKSERRDVLLLHQSLAEISRQDTSSELAQPVPAGTVLLDRMIRPRTLIHRGQITNALVESGGLSVTTKVEALQDGAAGQIIHIRNVSSRRDLTGKVVSDRTILINL*