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berkeley_reactor_200306_planktonic_scaffold_80596_85

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(115860..116588)

Top 3 Functional Annotations

Value Algorithm Source
Conserved domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JK59_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 36.4
  • Coverage: 247.0
  • Bit_score: 158
  • Evalue 5.20e-36
Conserved domain protein {ECO:0000313|EMBL:EDY84742.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.4
  • Coverage: 247.0
  • Bit_score: 158
  • Evalue 7.20e-36
flagellar basal-body rod protein FlgF similarity KEGG
DB: KEGG
  • Identity: 34.9
  • Coverage: 241.0
  • Bit_score: 146
  • Evalue 7.50e-33

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Taxonomy

Verrucomicrobiae bacterium DG1235 → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 729
ATGGAAGTCAGCCTTTATCAAGCCGCCGCCGCCATGAACGCCACTGAGCGCTGGCAGGATTTGATTGCCCAAAACCTGACGGTGGCTTCCACGCCCGGCGCGCGCAAGCAGGAGGTTTCGTTTTCCGCCGTCGCCGCCGGCCTGATGACCAGCGGGCAAGCCAGCGTGATTCCCGCCGTGGTGGCCACCACCAATTTCAAGCAAGGCGAACTTCGCCCGACGAACGGCCCGCTGGATTTTGCGCTGGAAGGCAAGGGCTTTTTCACGGTTCAACTGCCGAACGGGCAAAACGCCTATACGCGCGACGGCGAATTTCATTTGGACGCCCAGGGTCAGCTCGTCACCAAACAAGGTTATCCGGTCATGAGCGACAGCGGCCTGGTGGCGATGGACCCGAATAATTCGAGCAAGCTGAACGTCTCCGCCACGGGCGAAATCAGCCAGGGCACCGACACCAAGGGAAAGCTGCTGCTGACCAATTTCAACCGGCCGCAATTGCTGACCGCCACGGGCGACGGCTTGTTTCTCGCAAACAATCCCGCGCTGCAGCCGGTGCCGACAACCGACACCCATGTGCGCCAGGGCTTCGTGGAGCAGGCCAACACGTCGCCGACCCTGGAAATGTCCGGCCTCATCACCGCCATGCGGATGTTTGAGTCCAATGAAAAAGTGCTCCAGATGCAGAGCGACCGCATGAGCCGCACCATCAGCGAACTCGGTGGTTCTTGA
PROTEIN sequence
Length: 243
MEVSLYQAAAAMNATERWQDLIAQNLTVASTPGARKQEVSFSAVAAGLMTSGQASVIPAVVATTNFKQGELRPTNGPLDFALEGKGFFTVQLPNGQNAYTRDGEFHLDAQGQLVTKQGYPVMSDSGLVAMDPNNSSKLNVSATGEISQGTDTKGKLLLTNFNRPQLLTATGDGLFLANNPALQPVPTTDTHVRQGFVEQANTSPTLEMSGLITAMRMFESNEKVLQMQSDRMSRTISELGGS*