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berkeley_reactor_200306_planktonic_scaffold_161060_12

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 13802..14839

Top 3 Functional Annotations

Value Algorithm Source
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCF3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 38.1
  • Coverage: 349.0
  • Bit_score: 228
  • Evalue 7.60e-57
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:EEF62621.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.1
  • Coverage: 349.0
  • Bit_score: 228
  • Evalue 1.10e-56
putative signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 223.0
  • Bit_score: 167
  • Evalue 3.40e-39

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1038
ATGAGCAACCATTTGACCATGGCCCGCCTCAAAACAGCGTGGATGCAAACTGCGGGAAGGATGTCGCCTCGTGCGTCCATGGTGGCAGGCATGGTTTTGCTGTTGGTCATTGCGCTGGTTGACTGGACTTCCAATCCGCTGATCGGGTTTTCCATTTTTTATCTGGTTCCCATTGCCTTGGTGACATGGAAACATTCCCGCCATGCGGGGTTGGGCATGGCGGTGCTTTGCGGCGTCGTCTGGCTGTTGATTGAATTGAAGACCAACACGCTTTATCCGAACCTGGTTATTCCCCTCTGGAACGCCGCCCTGCGCGCCTTGTTTTTTTATCTGGTGTCGGCCTTGATGTCGGAAGTGTTACAGCGCAAGCGCGTGGAACAATCCCTTCGTGAATCGGAACGGCAGGTCGCCGAAGTCAGCGAGCGCGAACAACGGCGCATCGGCGAGGATTTGCACGACGGTTTGTGCCAGCAGTTGGTCGGCATAGCTTTTGCCGCGCGCAAACTGGCCGCCCGGCTTTCCGATTTGTCCCTGCCGGAAACGAAGGATGCTACGGAAATTGCCGAATTGCTGGGCGACGCCATTTCGCAGGCCCGCGACGCGGCGCGCGGATTGTATCTGGTGCAATTGGAAGCCAATGGCCTCGCTTCCGCGCTTGACGAGCTGGCAACCCGGACCCGGTCGCGACACAGCATAGCCTGCCGGTTTATCGGCAATATTACAGGTCCAATCGCCGGGGAAACGGTTGTCACCAGTTTGTTTCGCATTGCCCAGGAAGCGATCACCAACGCCATCAAACACGCGCAAACAACGGAAATCATCATCACTCTGACGGTAGATGACCGAAAAATCCGGCTCGATGTCGAGGATAATGGCTGCGGCCTTCCATCCGGCTTTGAAGCCGGCGAGGGCCTGGGCTTGCAGATTATGAATTATCGCGCGCAAATGATTCAAGCTACGTTTAATATTGTCACTCGTTCCGGCGGCGGCACCCGCGTCACCTGTCAGCTTTCCCAACCAGCCGGATCCAAAGCATGA
PROTEIN sequence
Length: 346
MSNHLTMARLKTAWMQTAGRMSPRASMVAGMVLLLVIALVDWTSNPLIGFSIFYLVPIALVTWKHSRHAGLGMAVLCGVVWLLIELKTNTLYPNLVIPLWNAALRALFFYLVSALMSEVLQRKRVEQSLRESERQVAEVSEREQRRIGEDLHDGLCQQLVGIAFAARKLAARLSDLSLPETKDATEIAELLGDAISQARDAARGLYLVQLEANGLASALDELATRTRSRHSIACRFIGNITGPIAGETVVTSLFRIAQEAITNAIKHAQTTEIIITLTVDDRKIRLDVEDNGCGLPSGFEAGEGLGLQIMNYRAQMIQATFNIVTRSGGGTRVTCQLSQPAGSKA*