ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_161060_61

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(76392..77285)

Top 3 Functional Annotations

Value Algorithm Source
Glucan endo-1,3-beta-D-glucosidase {ECO:0000313|EMBL:EEF63051.1}; EC=3.2.1.39 {ECO:0000313|EMBL:EEF63051.1};; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.2
  • Coverage: 306.0
  • Bit_score: 320
  • Evalue 1.40e-84
Glucan endo-1,3-beta-D-glucosidase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAL6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 306.0
  • Bit_score: 320
  • Evalue 9.60e-85
glycoside hydrolase family protein similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 267.0
  • Bit_score: 318
  • Evalue 1.80e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 894
ATGATTATGAAAGCGAAATTCATGCAAGCAAAACACGTGTTGATCCACCGCTGGGTGTCTGCCGCCGCGCTGGCGGCCGGCCTCTTCGCCGCGCTGCCGGCCGTGCCGGCCGGGGAGGCGGCGGCAGCGGGCGGCGTGGGCTGGCGGTTGGTGTGGAGCGACGAGTTCAACCAGCCCGATGGCAGCGCTCCAGACACCGCGAACTGGAACTACGAACTCGGCGGCGACGGCTGGGGCAATGCGGAACTGGAAGATTACACCGACCGCACCAACAACGTCCGGATCGCGGACGGCAAGCTGGTCATTGAGGCGCGGCGCGAGGATTACGGGGGCAGCCAGTTCACTTCCGGCCGGTTGCAGACCCGGGGAAAGCGGAGCTGGACCTACGGCAAATTCGTCGCGCGAATCAAAATTCCGCGCGGGCAGGGATTGTGGCCGGCGTTTTGGATGTTGGGAACCAATATCACTGCGGTCGGCTGGCCGAAGTGCGGGGAGATTGACATCATGGAAAACATCGGGCGCGAGCCGGACACGATTCATGGAACCATTCACGGGCCGGGGTATTCGGGCGATGCGGGCATCGGCGGACCGGTGTCGTTGCCGGAGGGTGCCGCCGTGGCGGATGATTTTCATTTGTTCGCCGTGGAGTGCGATACGAACCGCATCACGTGGTCGCTCGACGGCAGGGATTATTTTCAAGTCTGCCCGACCAATCTGCCGGCGGGGCGGCGCTGGGTCTTCAATGCGCCAAAATTCTTATTGCTGAACCTGGCGGTGGGCGGCCGGTGGCCGGGAAACCCCGATGAAACCACGGTGTTTCCGCAACCGATGATCGTGGATTACGTGCGGGTTTACGAACGGGCGGATGACGCCGCGCATCCGTCCCCGCAATGA
PROTEIN sequence
Length: 298
MIMKAKFMQAKHVLIHRWVSAAALAAGLFAALPAVPAGEAAAAGGVGWRLVWSDEFNQPDGSAPDTANWNYELGGDGWGNAELEDYTDRTNNVRIADGKLVIEARREDYGGSQFTSGRLQTRGKRSWTYGKFVARIKIPRGQGLWPAFWMLGTNITAVGWPKCGEIDIMENIGREPDTIHGTIHGPGYSGDAGIGGPVSLPEGAAVADDFHLFAVECDTNRITWSLDGRDYFQVCPTNLPAGRRWVFNAPKFLLLNLAVGGRWPGNPDETTVFPQPMIVDYVRVYERADDAAHPSPQ*