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berkeley_reactor_200306_planktonic_scaffold_161060_82

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(100543..102033)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00037096EB similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 477.0
  • Bit_score: 532
  • Evalue 2.70e-148
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:EIC28787.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 471.0
  • Bit_score: 529
  • Evalue 4.20e-147
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 487.0
  • Bit_score: 471
  • Evalue 1.60e-130

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Taxonomy

Methylomicrobium album → Methylomicrobium → Methylococcales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1491
ATGAAAATGAAACCTTTATTTCTCGCAACCCTCGCGGCGGTTGCCCTCGCCCTGACGGCCGGCTGCACGGTCGGCCCGGATTATCACCCGCCGCAGGTGAGCGTGCCGAACCATTGGAGCGAACCGCTCGTGGGCGGCGAAACCAACGCGCCGGTGCCGCTGGCGGCGTGGTGGCAGAATTTTCACGACGCGGAACTGGATTCGCTCATCCAGCGCGCGGTGCAATCCAATCTCGATCTGCGCATCGCCCGGGCGCGGGTGCGCGAGGCGCGGGCGCAATACGGCGTCGCCGCCGCCAACCTCTGGCCGGCCGCCAATGCTGCCGGCACCTACGAACGCCAGCAGCAAAGCCGGCACCAGCCCGTGCTGGGCTCGCTGCCGATTCCATCGAACGTGCCGTTTGAAAACAATGTTTACCAGGCCGGCTTCGACGCCTCGTGGGAACTGGACGTGTTCGGTGGACAACGCCGTTCCGTCGAGGCCGCCCGGGCGGAAGTCGCGGCCTCTGAATACGGCCGGCGCGCCACTCTGCTGACCTTGCTGGGCGATGTCGCCCACAACTACGTGGCCGCGCGCGGCTACCAGCGCCGCCTGGCAATCGCCCGGGAAAACATCGCGGCGCAGGGAAAGGCGCTCGCCATCACGATCAACCGCTACACCAACGGCCTGACCAGCAACCTCGACGTGCAGCAGGCGAAAACCCTGCTGGCCACGACCCGCGCCGAAATCCCCACGCTGGAAAGTGCGCTGCAGGCGTCCATTCATCGGCTGGGCGTTTTGCTCGGCCAGCCGCCGGGTTCCTTGCTGGCGGAGTTGTCGCAGACCAAACCCATCCCGGCCGCGCCGCCCCAGGTTCCGGTTGGGTTGCCGTCGGATTTGCTGCTGCGCCGGCCCGATGTGCGGCGCGCCGAACGCGCGCTGGCCGCCGCCACCGCCAACATCGGCGTGGCCGAGTCGGATTTGTTCCCGAAATTTTCGCTCACCGGCGTGGGCGGTTTCGAGAGCATCAGCGCCAGCGACTGGTTCAGCAGCGGCAGCAAGTTCTGGTCAATCGGCCCGACGGTGCAGTGGAAAATTTTTGACGCCGGCCGCATTCGCTCCAACATCAAGGTGCAGAACGCCCGGCAGGAACAGGCGCTGGCCGCTTACGAAAAAACCGTGCTCGGCGCTTTTGAAGACGTCGAGAACGACCTCGTTGCCTACGCGAAGGAACAGGTGCGGCAGCGGTCGCTGGCCGATGCCGCCGCGTCCAGCCGGCAATCGCTGGACCTGGCGAACAAACTTTACGCCAACGGCCTGACGGATTTTCTGAATGTGCTGGAAGCCGAGCGTTCGTTGTATCAGGCGCAGGATCAACTGGTGCAAAGCGAACGCGCGGTTTCAGCCAATTTAATTTCGCTCTACAAGGCGCTGGGAGGTGGGTGGCAGACGGCGGAACGGACGGCGTCGCTGGCGATGACCCAGCGGCGTGCTTCCGAAACCAATCGCTGA
PROTEIN sequence
Length: 497
MKMKPLFLATLAAVALALTAGCTVGPDYHPPQVSVPNHWSEPLVGGETNAPVPLAAWWQNFHDAELDSLIQRAVQSNLDLRIARARVREARAQYGVAAANLWPAANAAGTYERQQQSRHQPVLGSLPIPSNVPFENNVYQAGFDASWELDVFGGQRRSVEAARAEVAASEYGRRATLLTLLGDVAHNYVAARGYQRRLAIARENIAAQGKALAITINRYTNGLTSNLDVQQAKTLLATTRAEIPTLESALQASIHRLGVLLGQPPGSLLAELSQTKPIPAAPPQVPVGLPSDLLLRRPDVRRAERALAAATANIGVAESDLFPKFSLTGVGGFESISASDWFSSGSKFWSIGPTVQWKIFDAGRIRSNIKVQNARQEQALAAYEKTVLGAFEDVENDLVAYAKEQVRQRSLADAAASSRQSLDLANKLYANGLTDFLNVLEAERSLYQAQDQLVQSERAVSANLISLYKALGGGWQTAERTASLAMTQRRASETNR*