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berkeley_reactor_200306_planktonic_scaffold_161060_85

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 105004..106674

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, NifA subfamily, Fis Family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF66_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 526.0
  • Bit_score: 638
  • Evalue 3.90e-180
transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 541.0
  • Bit_score: 547
  • Evalue 2.60e-153
Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 539.0
  • Bit_score: 648
  • Evalue 6.90e-183

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Taxonomy

RIFOXYC12_FULL_Lentisphaerae_60_16_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 1671
GTGGCTTACATACCGGCGGTGGACTCAAAACCCTTCGACCGTGAAACCCAGTTTGACCCCGGTTTTGCCAGCCGGCTGCTGCTGGAAATCGCGCAGGAACATTCGCTGGAACAACTGCTGAAAACTCTGGTGCGCCGGGTGCTCGAACGGGAACACGTCGCGCGCGTGCGCATCTGGCTGGTGGAGAAGGGCGATGTTTGCGCGACGTGCGTGCGCCGCTCCGAATGCCCCGATCAAACGCGCTGTTTGCACGCGGTCGCCGGCGGCGGCAATTTGATCAGCGGTTCGGATCAGGAAGAGGAATACGTCAAGCTGACGGACCGTTTTTCCCGCATTCCGCTGGGCGCGGGGGTGGTGGGGAAAATTGCCCGGACCGGACAGCAGATTGTCCTGCGCGACCTCGACCAGAATGCGGGTGAATTGTCCCACGTGGAGTGGCTCAAGCCGCAACGGATTCGCGGGTTCAACGGGGTGCCGATCATTTACAAGGGCGAAGTGCTGGGCGTCATCGCGGTGTTCAGCCGGCGGAACGTGCCGGCCGGCGCGGAAGTGTGGGGGCGCGTGTTTGCGGATCACGTCGCCGGCGCCATCGCCAACATGCGGGCGTTCGAGGAAATCCAGCGGCTCAAGTCGCAGCTCGAGCAGCAAAACGCCTATCTCCAGGAAGAAGTCGTGGAAGCCAAAGCCTTCGGCGATCTCGTGGGGCAGAGCGCGGCGTTGCGGCAGATCATCAGCCAGATCGAACTCGTGGCGCCGACGGACGCCACCGTGCTCGTTCTCGGCGAAACCGGCACCGGCAAGGAGCTCGTGGCCCACGAAATTCACCGGCGCAGCCTGCGCAAGGACAAGCCGTTGATCCGGGTGAACTGCGCCGCGATTCCCAAGGAGCTTTACGAAAGCGAATTTTTCGGCCATGCGAAAGGCGCCTTCTCCGGCGCCATCAAGGACCGCGCCGGACGTTTCGAGGCGGCGGATGGCGGCACGTTGTTTCTGGATGAAATCGGCGAGGTGCCGCTGGAATTGCAGAGCAAGCTGCTGCGCGTGTTGCAGGAAAAACGCTATGAACGTGTGGGCGAAGACCGCACGCGCCAGGCGGACGTGCGCATCATCGGCGCGACGAACCGCGATTTGAAAGCCGAGGTGGCGGCGGGCCGGTTTCGCGAAGACTTGTATTACCGGCTCAACGTCTTCCCCGTGCAGGTCGCCGCGCTGCGTGAACGTCAGGAGGACATTCCGCAACTGGCCCGGCATTTCATCGAGTTGTCGGTCAAGGAGCTGCGCTGCCCCCGGCCGCGTCTGACCCGCGCGGGCATTGTCCAGCTCCAGGGCTACGACTGGCCCGGCAACATCCGCGAATTGCGGAACGTGATCGAACGCGCCGTCATTCTGGCGCGCGGACAGTTGCTCAACTTCGATCTGCCTTCCGGCAAAAAAAACGTGGGCGCGGCGCGGATCGCTCCGCAGCGGGACGGCGGAAAGGACCGGCCGGAATTTCTCACCGAATCCGAAATGGAGCAGCATCAGCGCGAAAACCTGCTGACGGTTCTCGAAAAAACCGGCTGGAAAATCAAAGGCCCGAACGGTGCGGCGGAATGGCTGGGCGTAAAGCCCACCACGCTGCTGTCGCGTATGAAAAAAATGGGCTTGCAACGGCCGGCTGGGAATGCGTGA
PROTEIN sequence
Length: 557
VAYIPAVDSKPFDRETQFDPGFASRLLLEIAQEHSLEQLLKTLVRRVLEREHVARVRIWLVEKGDVCATCVRRSECPDQTRCLHAVAGGGNLISGSDQEEEYVKLTDRFSRIPLGAGVVGKIARTGQQIVLRDLDQNAGELSHVEWLKPQRIRGFNGVPIIYKGEVLGVIAVFSRRNVPAGAEVWGRVFADHVAGAIANMRAFEEIQRLKSQLEQQNAYLQEEVVEAKAFGDLVGQSAALRQIISQIELVAPTDATVLVLGETGTGKELVAHEIHRRSLRKDKPLIRVNCAAIPKELYESEFFGHAKGAFSGAIKDRAGRFEAADGGTLFLDEIGEVPLELQSKLLRVLQEKRYERVGEDRTRQADVRIIGATNRDLKAEVAAGRFREDLYYRLNVFPVQVAALRERQEDIPQLARHFIELSVKELRCPRPRLTRAGIVQLQGYDWPGNIRELRNVIERAVILARGQLLNFDLPSGKKNVGAARIAPQRDGGKDRPEFLTESEMEQHQRENLLTVLEKTGWKIKGPNGAAEWLGVKPTTLLSRMKKMGLQRPAGNA*