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berkeley_reactor_200306_planktonic_scaffold_190120_4

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 3343..4104

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related-protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJL4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 252.0
  • Bit_score: 359
  • Evalue 2.10e-96
ABC transporter related-protein {ECO:0000313|EMBL:EEF59890.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 252.0
  • Bit_score: 359
  • Evalue 2.90e-96
macrolide ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 253.0
  • Bit_score: 356
  • Evalue 3.80e-96

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 762
ATGAATCCGGTTATCAAGCTTCAAGAGATCCGCAAAACCTACCGCACCGGCGAGGTGGATGTGCATGCGGTGCGGGGGATTTCGCTGGACATCATGCCCGGCGAATTCGTCGCCATCATGGGCGCGAGCGGTTCCGGCAAGTCCACCCTGATGAACACGATCGGCTGCCTGGACCGGCCGACCGGCGGGCATTACCACTTGGACGGCGTGGATGTGCTGTCGCGCAACCGGGACGCCCTGGCCGACATCCGGAACCAGAAGATCGGTTTTGTTTTTCAGGGCTTCAACCTGCTCTCCCGCACCACGGCTTTGGAGAATGTTGAAATGCCGATGCTATACAGCCATAACGGCGGATCCGCCCGGCAGCAGCGGGAAAATGCCTTGAAGGCGCTCGAACTGGTCGGCCTCGGGCAACGGGCCGATCACAAACCCAACCAGCTTTCCGGCGGCCAGCAGCAACGCGTGGCCATCGCCCGCGCGCTGGTGAACCGGCCCTCGCTGCTGCTGGCCGATGAACCGACCGGCAATCTCGACAGCCAGACCAGCATCGAGATCATGGGCGTGTTCCAGAAGCTGAACGATCAGGGCATCACCATCGTCATGGTGACGCATGAGCTGGACATTGCGCGTTACACGAAACGCAATGTCGTTTTGCGCGATGGCCAGATCGTCACCGACGAACTGGTCCCCAACCGGTTGAATGCCGAGGCGGAATTGCGCCGCCTGCGGGAGGCGCACCAGGCCATCAAACTGACAGAATGA
PROTEIN sequence
Length: 254
MNPVIKLQEIRKTYRTGEVDVHAVRGISLDIMPGEFVAIMGASGSGKSTLMNTIGCLDRPTGGHYHLDGVDVLSRNRDALADIRNQKIGFVFQGFNLLSRTTALENVEMPMLYSHNGGSARQQRENALKALELVGLGQRADHKPNQLSGGQQQRVAIARALVNRPSLLLADEPTGNLDSQTSIEIMGVFQKLNDQGITIVMVTHELDIARYTKRNVVLRDGQIVTDELVPNRLNAEAELRRLREAHQAIKLTE*