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berkeley_reactor_200306_planktonic_scaffold_190120_34

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 42839..43543

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00037A1742 similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 211.0
  • Bit_score: 281
  • Evalue 5.10e-73
Uncharacterized protein {ECO:0000313|EMBL:EEF58074.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.1
  • Coverage: 260.0
  • Bit_score: 112
  • Evalue 5.80e-22
N-terminal cleavage protein similarity KEGG
DB: KEGG
  • Identity: 28.8
  • Coverage: 233.0
  • Bit_score: 95
  • Evalue 1.10e-17

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 705
ATGGGAATCTTACGACGGCCAGGCCGGGTTTTTGGCACGGGTCTCCGTTTCACGGCGACGTGGCGGATCGGTTTTACCCTGGTGGAATTGCTGGTCGTCATCGCCATCATCGCCATTTTAGCCGCGCTGTTGCTGCCGGTTTTGAGCCGGGCCAGGGACACGGCCAGGGCGGTTGTGTGCCGGAACAATCTCAAACAGTGGGGCTTGGCCACACAGCTTTACGCGACCGATCACCAGGACTTTCTGCCGACCGACGGGTCGGCCAGCGGCACTTCCCGGAAAGCCGGCTGGTATGTGGATTTGCCCAAGGAAATGGACCTGCCGATTTATGCCCGCATGGAATGGCGGACCAATCCGGCGGTGGATCCCGGCAAATCGGTGTGGATCTGCCCGGCAAACACCCGCCGGAGCAACGGCAAAAATCTGTTTCACTATTGCTTGAATGAACACGTCAACGGCACCGGCGCCGGCAAACAGGTGAAACTGTCCTCGATCCGCCGGACGACCGCGACCGTGTGGCTGTTTGACAATGGCGGCAAGGCGCCCGTGGCGCAGGAAAACAACGTGCATACCAATCTGCACAATCACGGCGCGCAGTTCGTTTTTCTGGACGGGCATGTGCGGCGCTTTCGCAACACGCAATACTGGGATTTTTCCCGGCACAAGGGCATCACCAACAACCCGGAATTGGTGTGGTATCCCTGA
PROTEIN sequence
Length: 235
MGILRRPGRVFGTGLRFTATWRIGFTLVELLVVIAIIAILAALLLPVLSRARDTARAVVCRNNLKQWGLATQLYATDHQDFLPTDGSASGTSRKAGWYVDLPKEMDLPIYARMEWRTNPAVDPGKSVWICPANTRRSNGKNLFHYCLNEHVNGTGAGKQVKLSSIRRTTATVWLFDNGGKAPVAQENNVHTNLHNHGAQFVFLDGHVRRFRNTQYWDFSRHKGITNNPELVWYP*