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berkeley_reactor_200306_planktonic_scaffold_190120_45

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(54085..55056)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCC3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 317.0
  • Bit_score: 332
  • Evalue 4.50e-88
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEF62591.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 317.0
  • Bit_score: 332
  • Evalue 6.40e-88
araC; AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 299.0
  • Bit_score: 207
  • Evalue 4.80e-51

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 972
TTGAGCACGACCGCTTCAACCGCAAAATCTTCCCGCCCCGGTGCGGGCTTCACCGAAGCCGAAGCGTGGCGCGATGTCGGCAAGGGCTGGCAGCCGTTGTTCGGCAGCTTTCACGGTGCGGGCTACAGCATCGAGTGGCACGATTTTTACGCGAAACGCGAGTTCAACTGGGCCGCGAGTTTTCATCCCGGCTGCGTGGAACTTTGCCTGAACCTCGACGGGCACGGCTTTGTGGAAAGCGAAGGCGCCCGCGCGGAGTTTGCACCGAACACCGCCGGATTTTATCTGCGCCAGGACAAGCCGCTCGCCGCCAAGCGCGAAACCAACGAGCAACACCAGTTTCTCACCGTCGAATTTTCCTGCCCGTTTCTCGCCAAACATCTGGCCGGCATGGAATCCGTGCTGCATCCCATCGCCCGTGCGGCGGTTGAAAATTGCCCGTGCGAACCCGTGGTTGGCTCCATCGTGCGCCTGAACACGGCGCAGCAGCAGCTCATCGCCACGCTCCGGCAGCCGCCCGTTTACGCCTCGGCGCAGCCGTTGTGGTATCAGTGCAAGGCGCTGGAACTGGCCGTCACCTTCCTGCTCCAGCCGCCGCCGGAACAGGAAATGTTTTGCACGCGCCAGCAGCGGCTTGCGCAGGAACGGGTTGACCAGGTGATTTTCCTGCTAAAACAAAATCTCGCCGCGCCGCCGACGCTGGAGGAACTCGGCAAAAAAATCGGGTGCAGTCATTTTTATCTGAGCCGGATTTTTTCGGCGCAGACCGGCCGCACGATCACGCAACATCTGCGCCAACTGCGCATGGAACGCGCGGCGGAACTGCTCAAGTCGGGCGAATTCAACGTCACCGAAGCCGCGCTTGAGGTGGGCTACAACAGCCTGAGCCATTTCAGCGCCGCGTTTCACGAGACGTTTGGCTGCTGTCCGGGGCTGTATCCGCTGAAAATTCCGGGAAAGGTAAATGCGTGA
PROTEIN sequence
Length: 324
LSTTASTAKSSRPGAGFTEAEAWRDVGKGWQPLFGSFHGAGYSIEWHDFYAKREFNWAASFHPGCVELCLNLDGHGFVESEGARAEFAPNTAGFYLRQDKPLAAKRETNEQHQFLTVEFSCPFLAKHLAGMESVLHPIARAAVENCPCEPVVGSIVRLNTAQQQLIATLRQPPVYASAQPLWYQCKALELAVTFLLQPPPEQEMFCTRQQRLAQERVDQVIFLLKQNLAAPPTLEELGKKIGCSHFYLSRIFSAQTGRTITQHLRQLRMERAAELLKSGEFNVTEAALEVGYNSLSHFSAAFHETFGCCPGLYPLKIPGKVNA*