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berkeley_reactor_200306_planktonic_scaffold_204825_5

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 2513..3721

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI00030CD6F2 similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 387.0
  • Bit_score: 557
  • Evalue 8.30e-156
DegT/DnrJ/EryC1/StrS aminotransferase family protein {ECO:0000313|EMBL:CCQ89789.1}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 387.0
  • Bit_score: 551
  • Evalue 8.30e-154
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 403.0
  • Bit_score: 520
  • Evalue 2.40e-145

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Taxonomy

Nitrospina gracilis → Nitrospina → Nitrospinales → Nitrospinia → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 1209
ATGGCGACTACTACAACGAAAAGTGAGCCGGTAACGGCCGCGAACCTGCGCGACTGGCCGCTGATGTCGAACAACATCACGCGCGCAGATCTCGACACGCTGATCGAATTTCTCAAGCAGGACGATCCCATCCTGACGCAATCCAAAAACGTCATTGCGTTCGAGCAGGAATGGTCGCAATGGCTCGGCGTGAAGCACAGTGTGTTCGTGAATTCCGGTTCCTCCGCGAACCAGATCACCATGGCTGCGCTCAAGGAGCGCTTCGGCGGCGGCGAAGTCATCGTGCCGACGCTGACGTGGGTTTCCGACATTGCGTCGGTCATTCAGGCCGGTTTTGATCCGGTGTTCGTGGACATCAATCCGCGCACACTCGGCATGGACACCCAACAAGTGCTCGCAGAGCTGAACTCCTCGACCCGCGCCGTTTTCATCACGCACGTCCTAGGCTTTAACGCGCTTGACGATGTTTTGATTGCTGAATGTGAGAAGCGCAATATACCGATCATTGAGGACGTCTGCGAATCCCACGGCGCAACGTTCAAGGGCAGGAAACTCGGCAGCCTAGGCTTTGCCTCGAACTTCTCGTTCTACTACGCGCATCACATGAGCACCATCGAAGGTGGCATGGTATGCACCAATGATTCCGCGTTCTACGAGATGCTCCGCATGATGCGCTCGCACGGCATGGTGCGCGAGAGCAAGGACGACGCGTTGAAGGTGCGTTACAAATCCGAGTTCCCGGATCTGAACCCTGATTTCATCTTCGCGTTTCCGGCCTACAACGTCCGCAGCACGGAGCTCAACGCCGTATTGGGACGCGCACAATTGAAACGTATCGACGCGAACAACGAAAAACGCACGCGCAATCTAAACTTGTTCCTCGACAACCTCGACCCGAAGAAGTTCTACACCGACTTTGGCCGCGAGGGCAGTTGCAACTACGCCTTCACGCTGGTCTTGCGCGAAGCCGATCAAGCCTTGTGGAACCGCATCGAAACAACGCTGCGCGAACGCAAGATCGAATTTCGTCGTGGCCTATCCGGCGGCGGCAACCAGTTGCGTCAGCCGTTTCTGCGCCGTGAATTCGACTGTGCCGAGAACTATCCGCAGGTCAACCATGTCCATTTCTTTGGCGCTTACATCGGCAATTATCCCGACTTGGAAGCCGACCGCATCAAGGCGCTGTGCGAACTTTTGAATTCTTTGTGA
PROTEIN sequence
Length: 403
MATTTTKSEPVTAANLRDWPLMSNNITRADLDTLIEFLKQDDPILTQSKNVIAFEQEWSQWLGVKHSVFVNSGSSANQITMAALKERFGGGEVIVPTLTWVSDIASVIQAGFDPVFVDINPRTLGMDTQQVLAELNSSTRAVFITHVLGFNALDDVLIAECEKRNIPIIEDVCESHGATFKGRKLGSLGFASNFSFYYAHHMSTIEGGMVCTNDSAFYEMLRMMRSHGMVRESKDDALKVRYKSEFPDLNPDFIFAFPAYNVRSTELNAVLGRAQLKRIDANNEKRTRNLNLFLDNLDPKKFYTDFGREGSCNYAFTLVLREADQALWNRIETTLRERKIEFRRGLSGGGNQLRQPFLRREFDCAENYPQVNHVHFFGAYIGNYPDLEADRIKALCELLNSL*