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berkeley_reactor_200306_planktonic_scaffold_204825_11

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(10350..11111)

Top 3 Functional Annotations

Value Algorithm Source
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 253.0
  • Bit_score: 373
  • Evalue 1.50e-100
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIQ2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 253.0
  • Bit_score: 373
  • Evalue 1.10e-100
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 255.0
  • Bit_score: 206
  • Evalue 4.90e-51

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 762
ATGTCAAAAGTCTCTTTGCCGGCCATCGTCAAATATTGCGACCGGAGGTTGCGCACCGCCGAAATCGGCGATTACGACGGCGCCGCCAACGGTTTGCAGGTGCAAAACTCCGGCACGGTGACACGGCTTGCCGCGACGGTGGACGCCAGCCTGGCCACGGTGAAACTGGCCATTGCCGCCGGGGCGGACTTGCTCATTGTGCATCACGGTTTGTTTTGGTCGAAAACACATCCTTGGACCGGCCGGCGCCATGAATTGATCAAATTATTGGTGGAACATGATCTTGCCGTTTACAGCTCGCACCTGCCGCTGGACGCGCATCCTAAATGGGGCAACAACGCTCAACTCGGCGCGGCTTTGGGGTTCACGGGGCTAAAGCCATTTTTTTCCACGCACGGCCAGCCCATCGGACTCAAAACGCGAACAAACATTTCACGGTTGGAACTCGTCAAACGCCTGGAGCGGGCCACGGGAGCCAGCCCCAGATTGATTCCCGGCGGCCCGGAAATTTGCCGGCAGATCGGTGTTGTGACCGGCGGCGCGGGCGGGGACTTGAAATCAGCGGCGGCGGCGGGCGTGGACACCTTCATCACCGGCGAAGGACCGCATTGGACCTACGCGCTGGCCGAGGAGCTGGGATTAAACGTGCTTTACGGCGGGCATTACGCCACGGAAACGTTTGGCGTCAAGGCGCTGGCCGCGGAACTCTCGCGCAAGTTTAAACTGCCGTGGCAGTTTTTGGATCATCCCACCGGACTTTAA
PROTEIN sequence
Length: 254
MSKVSLPAIVKYCDRRLRTAEIGDYDGAANGLQVQNSGTVTRLAATVDASLATVKLAIAAGADLLIVHHGLFWSKTHPWTGRRHELIKLLVEHDLAVYSSHLPLDAHPKWGNNAQLGAALGFTGLKPFFSTHGQPIGLKTRTNISRLELVKRLERATGASPRLIPGGPEICRQIGVVTGGAGGDLKSAAAAGVDTFITGEGPHWTYALAEELGLNVLYGGHYATETFGVKALAAELSRKFKLPWQFLDHPTGL*